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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=72)
GYERLKEELAKAQRELKLKDEECERLSKVRDQLGQELEELTASLFEEAHKMVREANIKQA
TAEKQLKEAQGK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6f6p-a1-m1-cB 97 72 1.0000 0.7423 1.0000 1.62e-44 6f6p-a1-m1-cB_6f6p-a1-m1-cD
2 6f6p-a1-m1-cD 98 72 1.0000 0.7347 1.0000 1.67e-44 6f6p-a1-m1-cB_6f6p-a1-m1-cD, 6f6p-a1-m1-cC_6f6p-a1-m1-cD
3 6f6p-a1-m1-cC 89 72 1.0000 0.8090 1.0000 2.11e-44 6f6p-a1-m1-cC_6f6p-a1-m1-cD
4 4lhx-a2-m1-cC 72 72 1.0000 1.0000 1.0000 2.58e-44 4lhx-a2-m1-cD_4lhx-a2-m1-cC
5 4lhx-a2-m1-cD 71 71 0.9861 1.0000 1.0000 9.67e-44 4lhx-a2-m1-cD_4lhx-a2-m1-cC
6 4li0-a2-m1-cD 69 68 0.8194 0.8551 0.8676 2.01e-27 4li0-a2-m1-cC_4li0-a2-m1-cD
7 4li0-a2-m1-cC 69 68 0.8194 0.8551 0.8676 2.01e-27 4li0-a2-m1-cC_4li0-a2-m1-cD
8 2e7s-a1-m1-cA 112 69 0.3611 0.2321 0.3768 1.32e-06 2e7s-a1-m1-cA_2e7s-a1-m1-cB
9 2e7s-a3-m1-cF 122 69 0.3611 0.2131 0.3768 1.40e-06 2e7s-a3-m1-cE_2e7s-a3-m1-cF
10 2e7s-a3-m1-cE 122 69 0.3611 0.2131 0.3768 1.40e-06 2e7s-a3-m1-cE_2e7s-a3-m1-cF
11 2e7s-a1-m1-cB 119 69 0.3611 0.2185 0.3768 1.43e-06 2e7s-a1-m1-cA_2e7s-a1-m1-cB
12 2ocy-a2-m2-cB 146 65 0.3333 0.1644 0.3692 4.04e-05 2ocy-a2-m1-cA_2ocy-a2-m2-cB, 2ocy-a2-m1-cB_2ocy-a2-m2-cB, 2ocy-a2-m2-cA_2ocy-a2-m2-cB
13 2ocy-a2-m2-cA 146 65 0.3333 0.1644 0.3692 4.04e-05 2ocy-a2-m1-cA_2ocy-a2-m2-cA, 2ocy-a2-m2-cA_2ocy-a2-m2-cB
14 2ocy-a2-m1-cB 146 65 0.3333 0.1644 0.3692 4.04e-05 2ocy-a2-m1-cB_2ocy-a2-m2-cB
15 2ocy-a2-m1-cA 146 65 0.3333 0.1644 0.3692 4.04e-05 2ocy-a2-m1-cA_2ocy-a2-m2-cA, 2ocy-a2-m1-cA_2ocy-a2-m2-cB
16 4akg-a1-m1-cB 2650 72 0.3056 0.0083 0.3056 1.0 4akg-a1-m1-cA_4akg-a1-m1-cB
17 4akg-a1-m1-cA 2650 72 0.3056 0.0083 0.3056 1.0 4akg-a1-m1-cA_4akg-a1-m1-cB
18 4w8f-a3-m1-cA 2608 72 0.3056 0.0084 0.3056 1.2 4w8f-a3-m1-cA_4w8f-a3-m1-cB
19 4w8f-a3-m1-cB 2609 72 0.3056 0.0084 0.3056 1.4 4w8f-a3-m1-cA_4w8f-a3-m1-cB
20 3ku5-a1-m3-cB 172 58 0.2639 0.1105 0.3276 3.4 3ku5-a1-m2-cB_3ku5-a1-m3-cB
21 3ku5-a1-m2-cB 172 58 0.2639 0.1105 0.3276 3.4 3ku5-a1-m2-cB_3ku5-a1-m3-cB
22 4gpa-a1-m2-cA 379 32 0.1667 0.0317 0.3750 6.9 4gpa-a1-m1-cA_4gpa-a1-m2-cA
23 4gpa-a1-m1-cA 379 32 0.1667 0.0317 0.3750 6.9 4gpa-a1-m1-cA_4gpa-a1-m2-cA
24 2wrc-a1-m1-cA 474 43 0.2222 0.0338 0.3721 8.2 2wrc-a1-m1-cC_2wrc-a1-m1-cA
25 2wrc-a1-m1-cC 467 43 0.2222 0.0343 0.3721 8.3 2wrc-a1-m1-cC_2wrc-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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