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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=80)
GYIQERLKSLNDIETQLCSLQEASQVTFIFGELKRGNESVKPQFENHVKQFYERLDKSTT
QLRKEIQLLDENVGTRLLPI

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3r84-a19-m1-cA 80 80 1.0000 1.0000 1.0000 2.70e-54 3r84-a19-m1-cC_3r84-a19-m1-cA
2 3r84-a19-m1-cC 79 79 0.9875 1.0000 1.0000 1.32e-53 3r84-a19-m1-cC_3r84-a19-m1-cA
3 1to6-a2-m2-cB 371 58 0.1875 0.0404 0.2586 0.15 1to6-a2-m1-cA_1to6-a2-m2-cB, 1to6-a2-m2-cA_1to6-a2-m2-cB
4 1to6-a2-m2-cA 371 58 0.1875 0.0404 0.2586 0.15 1to6-a2-m2-cA_1to6-a2-m2-cB
5 1to6-a2-m1-cA 371 58 0.1875 0.0404 0.2586 0.15 1to6-a2-m1-cA_1to6-a2-m2-cB
6 5bv5-a6-m2-cC 311 51 0.1625 0.0418 0.2549 0.84 5bv5-a6-m2-cC_5bv5-a6-m5-cD
7 4m3l-a1-m1-cA 60 28 0.1625 0.2167 0.4643 2.3 4m3l-a1-m1-cD_4m3l-a1-m1-cA
8 7qi8-a1-m2-cA 462 32 0.1750 0.0303 0.4375 7.7 7qi8-a1-m1-cA_7qi8-a1-m2-cA
9 7qi8-a1-m1-cA 462 32 0.1750 0.0303 0.4375 7.7 7qi8-a1-m1-cA_7qi8-a1-m2-cA
10 4m3l-a1-m1-cB 58 27 0.1500 0.2069 0.4444 9.7 4m3l-a1-m1-cD_4m3l-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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