Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=92)
GYTELEKLHIMRDYLLPKQMEEHGLGRDKLQMNEEAMLKVIRQYTREAGVRNLNREAANI
CRKAARLIVSGEKKRVVVTPKTVESLLGKPRY

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Dimers
1 4git-a1-m1-cB 92 92 1.0000 1.0000 1.0000 1.11e-63 4git-a1-m1-cA_4git-a1-m1-cB
2 4git-a1-m1-cA 92 92 1.0000 1.0000 1.0000 1.11e-63 4git-a1-m1-cA_4git-a1-m1-cB
3 3m6a-a1-m1-cC 496 89 0.5543 0.1028 0.5730 1.80e-30 3m6a-a1-m1-cA_3m6a-a1-m1-cC
4 3m6a-a1-m1-cA 496 89 0.5543 0.1028 0.5730 1.80e-30 3m6a-a1-m1-cA_3m6a-a1-m1-cC
5 5e7s-a2-m3-cI 287 93 0.4239 0.1359 0.4194 6.55e-18 5e7s-a2-m3-cI_5e7s-a2-m1-cG
6 5e7s-a1-m1-cC 287 93 0.4239 0.1359 0.4194 6.55e-18 5e7s-a1-m1-cC_5e7s-a1-m2-cE
7 5e7s-a2-m1-cG 289 93 0.4239 0.1349 0.4194 6.55e-18 5e7s-a2-m3-cI_5e7s-a2-m1-cG
8 4ypm-a1-m6-cA 290 93 0.4239 0.1345 0.4194 6.69e-18 4ypm-a1-m2-cA_4ypm-a1-m6-cA
9 4ypm-a1-m2-cA 290 93 0.4239 0.1345 0.4194 6.69e-18 4ypm-a1-m2-cA_4ypm-a1-m6-cA
10 6v11-a1-m1-cB 496 89 0.4022 0.0746 0.4157 8.87e-18 6v11-a1-m1-cB_6v11-a1-m1-cC
11 6wqh-a1-m1-cC 538 93 0.4239 0.0725 0.4194 2.25e-17 6wqh-a1-m1-cD_6wqh-a1-m1-cC
12 6wqh-a1-m1-cF 537 93 0.4239 0.0726 0.4194 2.27e-17 6wqh-a1-m1-cA_6wqh-a1-m1-cF
13 6wqh-a1-m1-cD 537 93 0.4239 0.0726 0.4194 2.27e-17 6wqh-a1-m1-cD_6wqh-a1-m1-cC
14 6wqh-a1-m1-cA 537 93 0.4239 0.0726 0.4194 2.27e-17 6wqh-a1-m1-cA_6wqh-a1-m1-cF
15 4ypl-a1-m1-cE 537 93 0.4239 0.0726 0.4194 2.36e-17 4ypl-a1-m1-cD_4ypl-a1-m1-cE
16 4ypl-a1-m1-cD 537 93 0.4239 0.0726 0.4194 2.36e-17 4ypl-a1-m1-cD_4ypl-a1-m1-cE, 4ypl-a1-m1-cD_4ypl-a1-m1-cF
17 4ypl-a1-m1-cB 537 93 0.4239 0.0726 0.4194 2.36e-17 4ypl-a1-m1-cA_4ypl-a1-m1-cB
18 4ypl-a1-m1-cA 537 93 0.4239 0.0726 0.4194 2.36e-17 4ypl-a1-m1-cA_4ypl-a1-m1-cB
19 4ypl-a1-m1-cF 538 93 0.4239 0.0725 0.4194 2.39e-17 4ypl-a1-m1-cD_4ypl-a1-m1-cF
20 7fid-a1-m1-cF 779 93 0.4239 0.0501 0.4194 2.95e-17 7fid-a1-m1-cC_7fid-a1-m1-cF
21 7fid-a1-m1-cD 779 93 0.4239 0.0501 0.4194 2.95e-17 7fid-a1-m1-cA_7fid-a1-m1-cD
22 7fid-a1-m1-cC 779 93 0.4239 0.0501 0.4194 2.95e-17 7fid-a1-m1-cC_7fid-a1-m1-cF
23 7fid-a1-m1-cA 779 93 0.4239 0.0501 0.4194 2.95e-17 7fid-a1-m1-cA_7fid-a1-m1-cD
24 7fd4-a1-m1-cF 779 93 0.4239 0.0501 0.4194 2.95e-17 7fd4-a1-m1-cD_7fd4-a1-m1-cF
25 7fd4-a1-m1-cE 779 93 0.4239 0.0501 0.4194 2.95e-17 7fd4-a1-m1-cB_7fd4-a1-m1-cE
26 7fd4-a1-m1-cD 779 93 0.4239 0.0501 0.4194 2.95e-17 7fd4-a1-m1-cD_7fd4-a1-m1-cF
27 7fd4-a1-m1-cB 779 93 0.4239 0.0501 0.4194 2.95e-17 7fd4-a1-m1-cA_7fd4-a1-m1-cB, 7fd4-a1-m1-cB_7fd4-a1-m1-cE
28 7fd4-a1-m1-cA 779 93 0.4239 0.0501 0.4194 2.95e-17 7fd4-a1-m1-cA_7fd4-a1-m1-cB
29 5e7s-a1-m2-cE 288 92 0.4130 0.1319 0.4130 4.50e-17 5e7s-a1-m1-cC_5e7s-a1-m2-cE
30 6v11-a1-m1-cC 503 89 0.3913 0.0716 0.4045 2.03e-15 6v11-a1-m1-cB_6v11-a1-m1-cC
31 7sxo-a1-m1-cF 549 92 0.3478 0.0583 0.3478 9.98e-13 7sxo-a1-m1-cE_7sxo-a1-m1-cF
32 7sxo-a1-m1-cE 546 93 0.3587 0.0604 0.3548 3.72e-12 7sxo-a1-m1-cE_7sxo-a1-m1-cF
33 1ylo-a1-m2-cF 334 43 0.1630 0.0449 0.3488 4.6 1ylo-a1-m1-cB_1ylo-a1-m2-cF, 1ylo-a1-m2-cE_1ylo-a1-m2-cF
34 1ylo-a1-m2-cE 334 43 0.1630 0.0449 0.3488 4.6 1ylo-a1-m2-cE_1ylo-a1-m2-cF
35 1ylo-a1-m1-cB 334 43 0.1630 0.0449 0.3488 4.6 1ylo-a1-m1-cB_1ylo-a1-m2-cF

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600