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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=83)
HAKPPYSYISLITMAIQQAPSKMLTLSEIYQWIMDLFPYYRQNQQRWQNSIRHSLSFNDC
FVKVARSPDKPGKGSYWTLHPDS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7vox-a2-m1-cB 83 83 1.0000 1.0000 1.0000 2.66e-59 7vox-a2-m1-cB_7vox-a2-m1-cH
2 7vox-a2-m1-cH 85 83 1.0000 0.9765 1.0000 2.83e-59 7vox-a2-m1-cB_7vox-a2-m1-cH
3 6xat-a2-m2-cA 77 78 0.4096 0.4416 0.4359 4.44e-22 6xat-a2-m1-cA_6xat-a2-m2-cA
4 6xat-a2-m1-cA 77 78 0.4096 0.4416 0.4359 4.44e-22 6xat-a2-m1-cA_6xat-a2-m2-cA
5 2a07-a1-m1-cI 81 78 0.3855 0.3951 0.4103 1.95e-20 2a07-a1-m1-cH_2a07-a1-m1-cI
6 7fj2-a2-m1-cE 79 79 0.4458 0.4684 0.4684 2.63e-20 7fj2-a2-m1-cE_7fj2-a2-m1-cF
7 7fj2-a2-m1-cF 80 79 0.4458 0.4625 0.4684 2.64e-20 7fj2-a2-m1-cE_7fj2-a2-m1-cF
8 3qrf-a2-m1-cI 82 77 0.3976 0.4024 0.4286 3.75e-20 3qrf-a2-m1-cH_3qrf-a2-m1-cI
9 3qrf-a2-m1-cH 82 77 0.3976 0.4024 0.4286 3.75e-20 3qrf-a2-m1-cH_3qrf-a2-m1-cI
10 2a07-a1-m1-cH 79 75 0.3735 0.3924 0.4133 4.29e-19 2a07-a1-m1-cH_2a07-a1-m1-cI
11 4u5w-a1-m1-cA 116 53 0.2410 0.1724 0.3774 0.42 4u5w-a1-m1-cC_4u5w-a1-m1-cA
12 6f38-a1-m1-cm 926 48 0.1807 0.0162 0.3125 0.48 6f38-a1-m1-cm_6f38-a1-m1-cf
13 6f38-a1-m1-cf 929 48 0.1807 0.0161 0.3125 0.48 6f38-a1-m1-cm_6f38-a1-m1-cf
14 7z8f-a1-m1-cm 4562 46 0.1687 0.0031 0.3043 2.1 7z8f-a1-m1-cm_7z8f-a1-m1-cf, 7z8f-a1-m1-cm_7z8f-a1-m1-cn
15 7z8f-a1-m1-cn 4566 46 0.1687 0.0031 0.3043 2.1 7z8f-a1-m1-cm_7z8f-a1-m1-cn
16 7z8f-a1-m1-cf 4579 46 0.1687 0.0031 0.3043 2.1 7z8f-a1-m1-ce_7z8f-a1-m1-cf, 7z8f-a1-m1-cm_7z8f-a1-m1-cf
17 7z8f-a1-m1-ce 4579 46 0.1687 0.0031 0.3043 2.1 7z8f-a1-m1-ce_7z8f-a1-m1-cf
18 5ipv-a1-m1-cD 622 42 0.1566 0.0209 0.3095 2.2 5ipv-a1-m1-cD_5ipv-a1-m1-cB
19 5ipv-a1-m1-cB 623 42 0.1566 0.0209 0.3095 2.2 5ipv-a1-m1-cD_5ipv-a1-m1-cB
20 4tll-a1-m1-cD 757 42 0.1566 0.0172 0.3095 2.5 4tll-a1-m1-cB_4tll-a1-m1-cD
21 4tll-a1-m1-cB 738 42 0.1566 0.0176 0.3095 3.0 4tll-a1-m1-cB_4tll-a1-m1-cD
22 4a64-a1-m1-cD 320 38 0.1566 0.0406 0.3421 3.7 4a64-a1-m1-cD_4a64-a1-m1-cA, 4a64-a1-m1-cD_4a64-a1-m1-cB, 4a64-a1-m1-cD_4a64-a1-m1-cC
23 6mmv-a1-m1-cB 642 44 0.1687 0.0218 0.3182 6.1 6mmv-a1-m1-cB_6mmv-a1-m1-cD
24 6mmv-a1-m1-cD 642 44 0.1687 0.0218 0.3182 6.1 6mmv-a1-m1-cB_6mmv-a1-m1-cD
25 6mmb-a1-m1-cB 748 44 0.1687 0.0187 0.3182 6.4 6mmb-a1-m1-cD_6mmb-a1-m1-cB
26 6mmp-a1-m1-cB 754 44 0.1687 0.0186 0.3182 6.4 6mmp-a1-m1-cB_6mmp-a1-m1-cD
27 6mmp-a1-m1-cD 756 44 0.1687 0.0185 0.3182 6.4 6mmp-a1-m1-cB_6mmp-a1-m1-cD
28 6mmi-a1-m1-cB 760 44 0.1687 0.0184 0.3182 6.4 6mmi-a1-m1-cB_6mmi-a1-m1-cD
29 6mmb-a1-m1-cD 746 44 0.1687 0.0188 0.3182 6.6 6mmb-a1-m1-cD_6mmb-a1-m1-cB
30 6mmi-a1-m1-cD 760 44 0.1687 0.0184 0.3182 6.8 6mmi-a1-m1-cB_6mmi-a1-m1-cD
31 5fxg-a1-m1-cD 634 42 0.1687 0.0221 0.3333 6.8 5fxg-a1-m1-cB_5fxg-a1-m1-cD
32 5fxg-a1-m1-cB 634 42 0.1687 0.0221 0.3333 6.8 5fxg-a1-m1-cB_5fxg-a1-m1-cD

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Reference:
Jacob Schwartz et al.

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