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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=80)
HAPLVDRLSALQNILSETPGIRLRALSWDAAGNRLQLDIAAVSSRALEQFTQRAQPRFRV
RPGDITKPDGIEGQLTLEEN

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5hl8-a1-m1-cA 80 80 1.0000 1.0000 1.0000 1.51e-53 5hl8-a1-m1-cD_5hl8-a1-m1-cA
2 5hl8-a1-m1-cD 68 76 0.8500 1.0000 0.8947 2.25e-40 5hl8-a1-m1-cD_5hl8-a1-m1-cA
3 8a9w-a1-m2-cA 75 76 0.6250 0.6667 0.6579 1.60e-28 8a9w-a1-m1-cA_8a9w-a1-m2-cA
4 8a9w-a1-m1-cA 75 76 0.6250 0.6667 0.6579 1.60e-28 8a9w-a1-m1-cA_8a9w-a1-m2-cA
5 7x0q-a1-m1-cB 357 19 0.1250 0.0280 0.5263 0.34 7x0q-a1-m1-cB_7x0q-a1-m1-cA
6 7x0q-a1-m1-cA 362 19 0.1250 0.0276 0.5263 0.35 7x0q-a1-m1-cB_7x0q-a1-m1-cA
7 4y8f-a1-m2-cA 251 46 0.1625 0.0518 0.2826 2.0 4y8f-a1-m1-cA_4y8f-a1-m2-cA
8 4y8f-a1-m1-cA 251 46 0.1625 0.0518 0.2826 2.0 4y8f-a1-m1-cA_4y8f-a1-m2-cA
9 5ez3-a2-m1-cD 541 23 0.1375 0.0203 0.4783 6.3 5ez3-a2-m1-cC_5ez3-a2-m1-cD
10 5ez3-a2-m1-cC 541 23 0.1375 0.0203 0.4783 6.3 5ez3-a2-m1-cC_5ez3-a2-m1-cD

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Reference:
Jacob Schwartz et al.

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