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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=68)
HARIDARLKEINEKKILQANEVLEHLTRIALGQEKEQVLGIGKGAETKTHVEVSAKDRIK
ALELLGKA

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3zqn-a1-m1-cC 68 68 1.0000 1.0000 1.0000 9.86e-42 3zqn-a1-m1-cB_3zqn-a1-m1-cC
2 3zqn-a1-m1-cB 68 68 1.0000 1.0000 1.0000 9.86e-42 3zqn-a1-m1-cB_3zqn-a1-m1-cC
3 3zqq-a1-m3-cC 134 68 0.9265 0.4701 0.9265 1.19e-33 3zqq-a1-m2-cB_3zqq-a1-m3-cC, 3zqq-a1-m2-cC_3zqq-a1-m3-cC, 3zqq-a1-m3-cB_3zqq-a1-m3-cC
4 3zqq-a1-m2-cC 134 68 0.9265 0.4701 0.9265 1.19e-33 3zqq-a1-m2-cC_3zqq-a1-m3-cC
5 3zqq-a1-m3-cA 132 68 0.9118 0.4697 0.9118 4.87e-33 3zqq-a1-m3-cB_3zqq-a1-m3-cA
6 3zqq-a1-m3-cB 77 55 0.7941 0.7013 0.9818 1.73e-29 3zqq-a1-m3-cB_3zqq-a1-m3-cA, 3zqq-a1-m3-cB_3zqq-a1-m3-cC
7 3zqq-a1-m2-cB 77 55 0.7941 0.7013 0.9818 1.73e-29 3zqq-a1-m2-cB_3zqq-a1-m3-cC
8 3qyj-a3-m1-cA 291 55 0.2500 0.0584 0.3091 2.1 3qyj-a3-m2-cB_3qyj-a3-m1-cA
9 3qyj-a3-m2-cB 290 55 0.2500 0.0586 0.3091 2.2 3qyj-a3-m2-cB_3qyj-a3-m1-cA

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Reference:
Jacob Schwartz et al.

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