Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=70)
HARMSKEIADKSHRLRQMRGEELQGLDIEELQQLEKALETGLTRVIETKSDKIMSEISEL
QKKGMQLMDE

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7xgs-a1-m2-cA 70 70 1.0000 1.0000 1.0000 1.10e-43 7xgs-a1-m1-cA_7xgs-a1-m2-cA
2 7xgs-a1-m1-cA 70 70 1.0000 1.0000 1.0000 1.10e-43 7xgs-a1-m1-cA_7xgs-a1-m2-cA
3 3lyg-a1-m2-cA 116 47 0.2857 0.1724 0.4255 0.089 3lyg-a1-m1-cA_3lyg-a1-m2-cA
4 3lyg-a1-m1-cA 116 47 0.2857 0.1724 0.4255 0.089 3lyg-a1-m1-cA_3lyg-a1-m2-cA
5 4ox0-a2-m2-cC 91 48 0.2000 0.1538 0.2917 0.32 4ox0-a2-m2-cC_4ox0-a2-m1-cB, 4ox0-a2-m2-cC_4ox0-a2-m2-cB
6 4ox0-a2-m2-cB 95 48 0.2000 0.1474 0.2917 0.35 4ox0-a2-m2-cC_4ox0-a2-m2-cB
7 4ox0-a2-m1-cB 95 48 0.2000 0.1474 0.2917 0.35 4ox0-a2-m2-cC_4ox0-a2-m1-cB
8 5vkq-a1-m1-cD 1499 42 0.2143 0.0100 0.3571 3.7 5vkq-a1-m1-cC_5vkq-a1-m1-cD
9 5vkq-a1-m1-cC 1499 42 0.2143 0.0100 0.3571 3.7 5vkq-a1-m1-cC_5vkq-a1-m1-cD
10 3kt3-a2-m1-cC 403 49 0.2429 0.0422 0.3469 4.6 3kt3-a2-m1-cC_3kt3-a2-m1-cD
11 3kt3-a2-m1-cD 409 49 0.2429 0.0416 0.3469 4.8 3kt3-a2-m1-cC_3kt3-a2-m1-cD
12 4ww4-a2-m9-cA 416 37 0.1714 0.0288 0.3243 5.5 4ww4-a2-m2-cA_4ww4-a2-m9-cA
13 4ww4-a2-m2-cA 416 37 0.1714 0.0288 0.3243 5.5 4ww4-a2-m2-cA_4ww4-a2-m9-cA
14 8av6-a1-m1-cB 438 32 0.1571 0.0251 0.3438 5.9 8av6-a1-m1-cB_8av6-a1-m1-cA
15 8av6-a1-m1-cA 449 32 0.1571 0.0245 0.3438 5.9 8av6-a1-m1-cB_8av6-a1-m1-cA
16 1dmu-a1-m2-cA 299 39 0.1857 0.0435 0.3333 9.5 1dmu-a1-m1-cA_1dmu-a1-m2-cA
17 1dmu-a1-m1-cA 299 39 0.1857 0.0435 0.3333 9.5 1dmu-a1-m1-cA_1dmu-a1-m2-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600