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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=70)
HARMSKEIADKSHRLRQMRGEELQGLDIEELQQLEKALETGLTRVIETKSDKIMSEISEL
QKKGMQLMDE

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7xgs-a1-m2-cA 70 70 1.0000 1.0000 1.0000 1.10e-43 7xgs-a1-m1-cA_7xgs-a1-m2-cA
2 7xgs-a1-m1-cA 70 70 1.0000 1.0000 1.0000 1.10e-43 7xgs-a1-m1-cA_7xgs-a1-m2-cA
3 3lyg-a1-m2-cA 116 47 0.2857 0.1724 0.4255 0.089 3lyg-a1-m1-cA_3lyg-a1-m2-cA
4 3lyg-a1-m1-cA 116 47 0.2857 0.1724 0.4255 0.089 3lyg-a1-m1-cA_3lyg-a1-m2-cA
5 4ox0-a2-m2-cC 91 48 0.2000 0.1538 0.2917 0.32 4ox0-a2-m2-cC_4ox0-a2-m1-cB, 4ox0-a2-m2-cC_4ox0-a2-m2-cB
6 4ox0-a2-m2-cB 95 48 0.2000 0.1474 0.2917 0.35 4ox0-a2-m2-cC_4ox0-a2-m2-cB
7 4ox0-a2-m1-cB 95 48 0.2000 0.1474 0.2917 0.35 4ox0-a2-m2-cC_4ox0-a2-m1-cB
8 5vkq-a1-m1-cD 1499 42 0.2143 0.0100 0.3571 3.7 5vkq-a1-m1-cC_5vkq-a1-m1-cD
9 5vkq-a1-m1-cC 1499 42 0.2143 0.0100 0.3571 3.7 5vkq-a1-m1-cC_5vkq-a1-m1-cD
10 3kt3-a2-m1-cC 403 49 0.2429 0.0422 0.3469 4.6 3kt3-a2-m1-cC_3kt3-a2-m1-cD
11 3kt3-a2-m1-cD 409 49 0.2429 0.0416 0.3469 4.8 3kt3-a2-m1-cC_3kt3-a2-m1-cD
12 4ww4-a2-m9-cA 416 37 0.1714 0.0288 0.3243 5.5 4ww4-a2-m2-cA_4ww4-a2-m9-cA
13 4ww4-a2-m2-cA 416 37 0.1714 0.0288 0.3243 5.5 4ww4-a2-m2-cA_4ww4-a2-m9-cA
14 8av6-a1-m1-cB 438 32 0.1571 0.0251 0.3438 5.9 8av6-a1-m1-cB_8av6-a1-m1-cA
15 8av6-a1-m1-cA 449 32 0.1571 0.0245 0.3438 5.9 8av6-a1-m1-cB_8av6-a1-m1-cA
16 1dmu-a1-m2-cA 299 39 0.1857 0.0435 0.3333 9.5 1dmu-a1-m1-cA_1dmu-a1-m2-cA
17 1dmu-a1-m1-cA 299 39 0.1857 0.0435 0.3333 9.5 1dmu-a1-m1-cA_1dmu-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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