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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=61)
HCRLCHGKFSVFVRDFQRLLGVAVHQDPALSQFVCRNCHAQFYQCHSLLESFLQRVNVSP
M

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7ppp-a1-m1-cB 61 61 1.0000 1.0000 1.0000 3.99e-40 7ppp-a1-m1-cB_7ppp-a1-m1-cA
2 7ppp-a1-m1-cA 73 73 1.0000 0.8356 0.8356 5.47e-37 7ppp-a1-m1-cB_7ppp-a1-m1-cA
3 1qo8-a1-m1-cD 564 58 0.2623 0.0284 0.2759 1.9 1qo8-a1-m1-cA_1qo8-a1-m1-cD
4 1qo8-a1-m1-cA 564 58 0.2623 0.0284 0.2759 1.9 1qo8-a1-m1-cA_1qo8-a1-m1-cD
5 7dn4-a1-m1-cF 118 50 0.2459 0.1271 0.3000 5.3 7dn4-a1-m1-cC_7dn4-a1-m1-cF, 7dn4-a1-m1-cE_7dn4-a1-m1-cF
6 7dn4-a1-m1-cE 118 50 0.2459 0.1271 0.3000 5.3 7dn4-a1-m1-cE_7dn4-a1-m1-cF
7 7dn4-a1-m1-cC 118 50 0.2459 0.1271 0.3000 5.3 7dn4-a1-m1-cC_7dn4-a1-m1-cF
8 4d9i-a1-m1-cA 389 42 0.1967 0.0308 0.2857 6.3 4d9i-a1-m1-cA_4d9i-a1-m1-cB
9 4d9i-a1-m1-cB 390 42 0.1967 0.0308 0.2857 6.3 4d9i-a1-m1-cA_4d9i-a1-m1-cB
10 2o2e-a1-m1-cA 315 14 0.1311 0.0254 0.5714 9.7 2o2e-a1-m1-cA_2o2e-a1-m1-cB
11 2o2e-a1-m1-cB 316 14 0.1311 0.0253 0.5714 9.7 2o2e-a1-m1-cA_2o2e-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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