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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=58)
HDCAKVDLENAELRRKLIRTKRAFEDTYEKLRMANKAKAQVEKDIKNQILKTHNVLRN

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5mw0-a1-m1-cA 62 58 1.0000 0.9355 1.0000 8.70e-37 5mw0-a1-m1-cB_5mw0-a1-m1-cA
2 5mw0-a1-m1-cB 60 58 1.0000 0.9667 1.0000 1.16e-36 5mw0-a1-m1-cB_5mw0-a1-m1-cA
3 5i7c-a2-m1-cC 59 58 1.0000 0.9831 1.0000 1.44e-36 5i7c-a2-m1-cD_5i7c-a2-m1-cC
4 5i7c-a2-m1-cD 58 58 1.0000 1.0000 1.0000 1.50e-36 5i7c-a2-m1-cD_5i7c-a2-m1-cC
5 8ovp-a1-m1-cB 496 43 0.2586 0.0302 0.3488 0.21 8ovp-a1-m1-cB_8ovp-a1-m1-cA
6 8ovp-a1-m1-cA 499 43 0.2586 0.0301 0.3488 0.21 8ovp-a1-m1-cB_8ovp-a1-m1-cA
7 3cgb-a1-m1-cB 431 42 0.2241 0.0302 0.3095 2.0 3cgb-a1-m1-cA_3cgb-a1-m1-cB
8 3cgb-a1-m1-cA 431 42 0.2241 0.0302 0.3095 2.0 3cgb-a1-m1-cA_3cgb-a1-m1-cB
9 7ung-a1-m1-cA2 391 29 0.1897 0.0281 0.3793 2.4 7ung-a1-m1-cA3_7ung-a1-m1-cA2
10 7ung-a1-m1-cA1 391 29 0.1897 0.0281 0.3793 2.4 7ung-a1-m1-cA0_7ung-a1-m1-cA1
11 7ung-a1-m1-cA3 333 29 0.1897 0.0330 0.3793 2.6 7ung-a1-m1-cA3_7ung-a1-m1-cA2
12 8glv-a1-m1-cGt 4520 36 0.2414 0.0031 0.3889 4.9 8glv-a1-m1-cDb_8glv-a1-m1-cGt
13 8glv-a1-m1-cDb 4520 36 0.2414 0.0031 0.3889 4.9 8glv-a1-m1-cDb_8glv-a1-m1-cGt
14 7rro-a1-m1-cA1 396 28 0.1724 0.0253 0.3571 6.1 7rro-a1-m1-cA0_7rro-a1-m1-cA1
15 7rro-a1-m1-cA2 393 28 0.1724 0.0254 0.3571 6.1 7rro-a1-m1-cA3_7rro-a1-m1-cA2
16 7rro-a1-m1-cA3 334 28 0.1724 0.0299 0.3571 6.3 7rro-a1-m1-cA3_7rro-a1-m1-cA2
17 2qck-a2-m4-cA 155 51 0.2241 0.0839 0.2549 6.5 2qck-a2-m1-cA_2qck-a2-m4-cA, 2qck-a2-m3-cA_2qck-a2-m4-cA
18 2qck-a2-m3-cA 155 51 0.2241 0.0839 0.2549 6.5 2qck-a2-m3-cA_2qck-a2-m4-cA
19 2qck-a2-m1-cA 155 51 0.2241 0.0839 0.2549 6.5 2qck-a2-m1-cA_2qck-a2-m4-cA
20 6moi-a1-m2-cA 222 28 0.1724 0.0450 0.3571 8.0 6moi-a1-m1-cA_6moi-a1-m2-cA
21 6moi-a1-m1-cA 222 28 0.1724 0.0450 0.3571 8.0 6moi-a1-m1-cA_6moi-a1-m2-cA
22 2zgd-a2-m2-cA 96 49 0.2931 0.1771 0.3469 8.3 2zgd-a2-m1-cA_2zgd-a2-m2-cA
23 2zgd-a2-m1-cA 96 49 0.2931 0.1771 0.3469 8.3 2zgd-a2-m1-cA_2zgd-a2-m2-cA
24 2a4a-a4-m1-cA 250 35 0.2414 0.0560 0.4000 8.4 2a4a-a4-m1-cB_2a4a-a4-m1-cA
25 2a4a-a3-m1-cA 250 35 0.2414 0.0560 0.4000 8.4 2a4a-a3-m2-cB_2a4a-a3-m1-cA
26 2qh9-a1-m1-cB 168 48 0.2586 0.0893 0.3125 8.5 2qh9-a1-m1-cB_2qh9-a1-m1-cA
27 2qh9-a1-m1-cA 172 48 0.2586 0.0872 0.3125 8.7 2qh9-a1-m1-cB_2qh9-a1-m1-cA
28 2a4a-a4-m1-cB 247 35 0.2414 0.0567 0.4000 9.0 2a4a-a4-m1-cB_2a4a-a4-m1-cA
29 2a4a-a3-m2-cB 247 35 0.2414 0.0567 0.4000 9.0 2a4a-a3-m2-cB_2a4a-a3-m1-cA

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Reference:
Jacob Schwartz et al.

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