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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=78)
HDEQSVESIAEVFRCFICEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQLR
ELVNCRWAEEVTQQLDTL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3lrq-a2-m1-cB 78 78 1.0000 1.0000 1.0000 4.71e-52 3lrq-a2-m1-cB_3lrq-a2-m1-cC
2 3lrq-a2-m1-cC 80 77 0.9872 0.9625 1.0000 8.97e-51 3lrq-a2-m1-cB_3lrq-a2-m1-cC
3 2y43-a1-m1-cB 88 72 0.3077 0.2727 0.3333 1.41e-05 2y43-a1-m1-cA_2y43-a1-m1-cB
4 2y43-a1-m1-cA 88 72 0.3077 0.2727 0.3333 1.55e-05 2y43-a1-m1-cA_2y43-a1-m1-cB
5 3ztg-a1-m1-cB 92 49 0.2179 0.1848 0.3469 1.9 3ztg-a1-m1-cA_3ztg-a1-m1-cB
6 3ztg-a1-m1-cA 92 49 0.2179 0.1848 0.3469 1.9 3ztg-a1-m1-cA_3ztg-a1-m1-cB
7 4whv-a2-m1-cJ 101 46 0.1538 0.1188 0.2609 2.4 4whv-a2-m1-cI_4whv-a2-m1-cJ
8 4whv-a2-m1-cI 101 46 0.1538 0.1188 0.2609 2.4 4whv-a2-m1-cI_4whv-a2-m1-cJ
9 4ayc-a1-m2-cB 126 46 0.1538 0.0952 0.2609 3.7 4ayc-a1-m2-cB_4ayc-a1-m1-cA
10 1rmd-a1-m2-cA 116 44 0.2051 0.1379 0.3636 3.8 1rmd-a1-m1-cA_1rmd-a1-m2-cA
11 1rmd-a1-m1-cA 116 44 0.2051 0.1379 0.3636 3.8 1rmd-a1-m1-cA_1rmd-a1-m2-cA
12 4ayc-a1-m1-cA 136 46 0.1538 0.0882 0.2609 3.9 4ayc-a1-m2-cB_4ayc-a1-m1-cA
13 7p0h-a2-m1-cD 409 23 0.1282 0.0244 0.4348 5.1 7p0h-a2-m1-cB_7p0h-a2-m1-cD
14 7p0h-a2-m1-cB 409 23 0.1282 0.0244 0.4348 5.1 7p0h-a2-m1-cB_7p0h-a2-m1-cD

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Reference:
Jacob Schwartz et al.

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