Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=69)
HDHYADLVKFGQRLRELRTAKGLSQETLAFLSGLDRSYVGGVERGQRNVSLVNILKLATA
LDIEPRELF

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Dimers
1 1y7y-a1-m1-cA 69 69 1.0000 1.0000 1.0000 1.63e-45 1y7y-a1-m1-cB_1y7y-a1-m1-cA
2 1y7y-a1-m1-cB 66 66 0.9565 1.0000 1.0000 2.78e-42 1y7y-a1-m1-cB_1y7y-a1-m1-cA
3 2b5a-a2-m1-cD 76 61 0.4928 0.4474 0.5574 7.40e-19 2b5a-a2-m1-cC_2b5a-a2-m1-cD
4 2b5a-a2-m1-cC 76 61 0.4928 0.4474 0.5574 7.40e-19 2b5a-a2-m1-cC_2b5a-a2-m1-cD
5 3vk0-a2-m1-cB 87 56 0.3913 0.3103 0.4821 7.86e-11 3vk0-a2-m1-cB_3vk0-a2-m1-cC
6 3vk0-a2-m1-cC 88 56 0.3913 0.3068 0.4821 7.95e-11 3vk0-a2-m1-cB_3vk0-a2-m1-cC
7 6jq1-a1-m1-cA 129 62 0.3333 0.1783 0.3710 6.69e-06 6jq1-a1-m1-cA_6jq1-a1-m1-cB
8 6jq1-a1-m1-cB 130 62 0.3333 0.1769 0.3710 7.07e-06 6jq1-a1-m1-cA_6jq1-a1-m1-cB
9 3zkc-a1-m1-cB 63 61 0.3043 0.3333 0.3443 3.42e-05 3zkc-a1-m1-cA_3zkc-a1-m1-cB
10 3zkc-a1-m1-cA 61 61 0.3043 0.3443 0.3443 3.42e-05 3zkc-a1-m1-cA_3zkc-a1-m1-cB
11 6rmq-a2-m3-cB 121 55 0.3043 0.1736 0.3818 3.70e-05 6rmq-a2-m1-cB_6rmq-a2-m3-cB
12 6rmq-a2-m1-cB 121 55 0.3043 0.1736 0.3818 3.70e-05 6rmq-a2-m1-cB_6rmq-a2-m3-cB
13 1b0n-a6-m3-cA 103 55 0.2899 0.1942 0.3636 4.21e-05 1b0n-a6-m1-cA_1b0n-a6-m3-cA
14 1b0n-a6-m1-cA 103 55 0.2899 0.1942 0.3636 4.21e-05 1b0n-a6-m1-cA_1b0n-a6-m3-cA
15 1b0n-a5-m2-cA 103 55 0.2899 0.1942 0.3636 4.21e-05 1b0n-a5-m1-cA_1b0n-a5-m2-cA
16 1b0n-a5-m1-cA 103 55 0.2899 0.1942 0.3636 4.21e-05 1b0n-a5-m1-cA_1b0n-a5-m2-cA
17 1y9q-a1-m2-cA 173 54 0.2319 0.0925 0.2963 4.03e-04 1y9q-a1-m1-cA_1y9q-a1-m2-cA
18 1y9q-a1-m1-cA 173 54 0.2319 0.0925 0.2963 4.03e-04 1y9q-a1-m1-cA_1y9q-a1-m2-cA
19 4ryk-a1-m2-cA 290 56 0.2899 0.0690 0.3571 7.91e-04 4ryk-a1-m1-cA_4ryk-a1-m2-cA
20 4ryk-a1-m1-cA 290 56 0.2899 0.0690 0.3571 7.91e-04 4ryk-a1-m1-cA_4ryk-a1-m2-cA
21 2xj3-a1-m1-cB 65 56 0.2754 0.2923 0.3393 0.001 2xj3-a1-m1-cB_2xj3-a1-m1-cA
22 2xj3-a1-m1-cA 66 56 0.2754 0.2879 0.3393 0.001 2xj3-a1-m1-cB_2xj3-a1-m1-cA
23 2lyl-a1-m1-cB 66 56 0.2754 0.2879 0.3393 0.001 2lyl-a1-m1-cA_2lyl-a1-m1-cB
24 2lyl-a1-m1-cA 66 56 0.2754 0.2879 0.3393 0.001 2lyl-a1-m1-cA_2lyl-a1-m1-cB
25 7p4a-a1-m2-cA 241 49 0.2754 0.0788 0.3878 0.002 7p4a-a1-m1-cB_7p4a-a1-m2-cA, 7p4a-a1-m2-cB_7p4a-a1-m2-cA
26 7p4a-a1-m1-cA 241 49 0.2754 0.0788 0.3878 0.002 7p4a-a1-m2-cB_7p4a-a1-m1-cA
27 7ewc-a1-m1-cB 68 59 0.3333 0.3382 0.3898 0.002 7ewc-a1-m1-cB_7ewc-a1-m1-cA
28 3kxa-a2-m1-cD 127 48 0.2319 0.1260 0.3333 0.002 3kxa-a2-m1-cD_3kxa-a2-m1-cC
29 3kxa-a2-m1-cC 128 48 0.2319 0.1250 0.3333 0.002 3kxa-a2-m1-cD_3kxa-a2-m1-cC
30 7ewc-a1-m1-cA 70 59 0.3333 0.3286 0.3898 0.002 7ewc-a1-m1-cB_7ewc-a1-m1-cA
31 4ghj-a1-m1-cA 71 49 0.2174 0.2113 0.3061 0.004 4ghj-a1-m1-cA_4ghj-a1-m1-cB
32 4ghj-a1-m1-cB 74 49 0.2174 0.2027 0.3061 0.004 4ghj-a1-m1-cA_4ghj-a1-m1-cB
33 6af4-a2-m1-cF 91 54 0.2464 0.1868 0.3148 0.016 6af4-a2-m1-cF_6af4-a2-m1-cD
34 6af4-a2-m1-cD 92 54 0.2464 0.1848 0.3148 0.018 6af4-a2-m1-cF_6af4-a2-m1-cD
35 3eus-a1-m1-cB 77 55 0.2609 0.2338 0.3273 0.035 3eus-a1-m1-cB_3eus-a1-m1-cA
36 3eus-a1-m1-cA 85 55 0.2609 0.2118 0.3273 0.051 3eus-a1-m1-cB_3eus-a1-m1-cA
37 3f51-a3-m1-cF 93 41 0.2174 0.1613 0.3659 0.41 3f51-a3-m1-cD_3f51-a3-m1-cF
38 3f51-a3-m1-cD 93 41 0.2174 0.1613 0.3659 0.43 3f51-a3-m1-cD_3f51-a3-m1-cF
39 4ob4-a5-m2-cB 69 69 0.3043 0.3043 0.3043 0.49 4ob4-a5-m1-cB_4ob4-a5-m2-cB
40 4ob4-a5-m1-cB 69 69 0.3043 0.3043 0.3043 0.49 4ob4-a5-m1-cB_4ob4-a5-m2-cB
41 2ewt-a1-m2-cA 71 69 0.3043 0.2958 0.3043 0.49 2ewt-a1-m1-cA_2ewt-a1-m2-cA
42 2ewt-a1-m1-cA 71 69 0.3043 0.2958 0.3043 0.49 2ewt-a1-m1-cA_2ewt-a1-m2-cA
43 4jcy-a1-m1-cB 92 26 0.1594 0.1196 0.4231 1.3 4jcy-a1-m1-cA_4jcy-a1-m1-cB
44 4jcy-a1-m1-cA 92 26 0.1594 0.1196 0.4231 1.3 4jcy-a1-m1-cA_4jcy-a1-m1-cB
45 3bdn-a1-m1-cB 234 62 0.2754 0.0812 0.3065 1.9 3bdn-a1-m1-cA_3bdn-a1-m1-cB
46 3bdn-a1-m1-cA 234 62 0.2754 0.0812 0.3065 1.9 3bdn-a1-m1-cA_3bdn-a1-m1-cB
47 1lmb-a1-m1-c3 87 47 0.2319 0.1839 0.3404 6.2 1lmb-a1-m1-c3_1lmb-a1-m1-c4
48 1lrp-a2-m1-cC 89 47 0.2319 0.1798 0.3404 6.4 1lrp-a2-m1-cB_1lrp-a2-m1-cC
49 1lrp-a2-m1-cB 89 47 0.2319 0.1798 0.3404 6.4 1lrp-a2-m1-cB_1lrp-a2-m1-cC
50 7jvt-a1-m2-cD 199 47 0.2319 0.0804 0.3404 7.0 7jvt-a1-m1-cD_7jvt-a1-m2-cD
51 7jvt-a1-m1-cD 199 47 0.2319 0.0804 0.3404 7.0 7jvt-a1-m1-cD_7jvt-a1-m2-cD
52 1lmb-a1-m1-c4 92 47 0.2319 0.1739 0.3404 7.4 1lmb-a1-m1-c3_1lmb-a1-m1-c4
53 5woq-a2-m1-cC 83 54 0.2174 0.1807 0.2778 7.6 5woq-a2-m1-cC_5woq-a2-m1-cB
54 5woq-a2-m1-cB 85 54 0.2174 0.1765 0.2778 7.6 5woq-a2-m1-cC_5woq-a2-m1-cB
55 7cpy-a1-m1-cB 2262 19 0.1304 0.0040 0.4737 9.0 7cpy-a1-m1-cA_7cpy-a1-m1-cB
56 7cpy-a1-m1-cA 2262 19 0.1304 0.0040 0.4737 9.0 7cpy-a1-m1-cA_7cpy-a1-m1-cB

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600