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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=91)
HDNLVLIRMKPDENGRFGFNVKGGYDQKMPVIVSRVAPGTPADLCVPRLNEGDQVVLING
RDIAEHTHDQVVLFIKASCESGELMLLVRPN

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3nfk-a3-m1-cB 91 91 1.0000 1.0000 1.0000 5.62e-64 3nfk-a3-m1-cB_3nfk-a3-m1-cA
2 2vph-a1-m1-cA 98 92 0.9890 0.9184 0.9783 3.69e-61 2vph-a1-m1-cB_2vph-a1-m1-cA
3 3nfl-a5-m1-cA 92 92 0.9890 0.9783 0.9783 4.86e-61 3nfl-a5-m2-cD_3nfl-a5-m1-cA
4 3nfk-a3-m1-cA 92 92 0.9890 0.9783 0.9783 8.61e-61 3nfk-a3-m1-cB_3nfk-a3-m1-cA
5 3nfl-a5-m2-cD 89 90 0.9780 1.0000 0.9889 3.20e-60 3nfl-a5-m2-cD_3nfl-a5-m1-cA
6 2vph-a1-m1-cB 92 90 0.9341 0.9239 0.9444 9.78e-55 2vph-a1-m1-cB_2vph-a1-m1-cA
7 2vrf-a6-m1-cD 95 83 0.3187 0.3053 0.3494 1.84e-12 2vrf-a6-m1-cC_2vrf-a6-m1-cD
8 2vrf-a6-m1-cC 95 83 0.3187 0.3053 0.3494 1.84e-12 2vrf-a6-m1-cC_2vrf-a6-m1-cD
9 8ah6-a1-m1-cB 102 74 0.2527 0.2255 0.3108 1.59e-07 8ah6-a1-m1-cA_8ah6-a1-m1-cB
10 8ah6-a1-m1-cA 101 74 0.2527 0.2277 0.3108 1.65e-07 8ah6-a1-m1-cA_8ah6-a1-m1-cB
11 1tp5-a2-m2-cA 115 74 0.2527 0.2000 0.3108 2.05e-07 1tp5-a2-m1-cA_1tp5-a2-m2-cA
12 1tp5-a2-m1-cA 115 74 0.2527 0.2000 0.3108 2.05e-07 1tp5-a2-m1-cA_1tp5-a2-m2-cA
13 5jxb-a1-m1-cC 119 74 0.2527 0.1933 0.3108 2.69e-07 5jxb-a1-m1-cA_5jxb-a1-m1-cC
14 5jxb-a1-m1-cA 117 74 0.2527 0.1966 0.3108 2.74e-07 5jxb-a1-m1-cA_5jxb-a1-m1-cC
15 2xkx-a1-m1-cB 718 74 0.2527 0.0320 0.3108 2.02e-06 2xkx-a1-m1-cB_2xkx-a1-m1-cA
16 2xkx-a1-m1-cA 721 74 0.2527 0.0319 0.3108 2.02e-06 2xkx-a1-m1-cB_2xkx-a1-m1-cA
17 3dj1-a3-m6-cB 110 92 0.2967 0.2455 0.2935 2.22e-06 3dj1-a3-m5-cB_3dj1-a3-m6-cB, 3dj1-a3-m6-cB_3dj1-a3-m1-cA
18 3dj1-a3-m5-cB 110 92 0.2967 0.2455 0.2935 2.22e-06 3dj1-a3-m5-cB_3dj1-a3-m6-cB
19 3dj1-a3-m1-cA 115 96 0.2967 0.2348 0.2812 1.01e-05 3dj1-a3-m6-cB_3dj1-a3-m1-cA
20 7qsb-a1-m1-cA 84 79 0.2967 0.3214 0.3418 1.80e-05 7qsb-a1-m1-cB_7qsb-a1-m1-cA
21 2fne-a4-m1-cB 100 75 0.2637 0.2400 0.3200 3.19e-05 2fne-a4-m1-cB_2fne-a4-m2-cC
22 2fne-a4-m2-cC 104 75 0.2637 0.2308 0.3200 3.31e-05 2fne-a4-m1-cB_2fne-a4-m2-cC
23 7qrt-a1-m1-cB 91 76 0.2747 0.2747 0.3289 4.63e-05 7qrt-a1-m1-cB_7qrt-a1-m1-cA
24 7qrt-a1-m1-cA 92 76 0.2747 0.2717 0.3289 4.71e-05 7qrt-a1-m1-cB_7qrt-a1-m1-cA
25 3r69-a3-m1-cA 85 82 0.2747 0.2941 0.3049 5.77e-05 3r69-a3-m1-cA_3r69-a3-m1-cB
26 5vwi-a1-m1-cB 87 81 0.2967 0.3103 0.3333 6.52e-05 5vwi-a1-m1-cB_5vwi-a1-m1-cA
27 3qe1-a1-m2-cA 102 95 0.3516 0.3137 0.3368 7.87e-05 3qe1-a1-m1-cA_3qe1-a1-m2-cA
28 3qe1-a1-m1-cA 102 95 0.3516 0.3137 0.3368 7.87e-05 3qe1-a1-m1-cA_3qe1-a1-m2-cA
29 3qdo-a1-m2-cA 109 95 0.3516 0.2936 0.3368 8.26e-05 3qdo-a1-m1-cA_3qdo-a1-m2-cA
30 3qdo-a1-m1-cA 109 95 0.3516 0.2936 0.3368 8.26e-05 3qdo-a1-m1-cA_3qdo-a1-m2-cA
31 3r68-a2-m2-cA 85 82 0.2637 0.2824 0.2927 1.27e-04 3r68-a2-m1-cA_3r68-a2-m2-cA
32 3r68-a2-m1-cA 85 82 0.2637 0.2824 0.2927 1.27e-04 3r68-a2-m1-cA_3r68-a2-m2-cA
33 3r69-a3-m1-cB 87 82 0.2637 0.2759 0.2927 1.51e-04 3r69-a3-m1-cA_3r69-a3-m1-cB
34 2ego-a1-m1-cB 90 75 0.2527 0.2556 0.3067 1.60e-04 2ego-a1-m1-cA_2ego-a1-m1-cB
35 2ego-a1-m1-cA 88 73 0.2418 0.2500 0.3014 2.08e-04 2ego-a1-m1-cA_2ego-a1-m1-cB
36 5vwi-a1-m1-cA 92 86 0.2967 0.2935 0.3140 2.51e-04 5vwi-a1-m1-cB_5vwi-a1-m1-cA
37 5glj-a1-m1-cB 93 88 0.2637 0.2581 0.2727 4.06e-04 5glj-a1-m1-cB_5glj-a1-m1-cA, 5glj-a1-m1-cB_5glj-a1-m1-cD
38 5glj-a1-m1-cD 96 88 0.2637 0.2500 0.2727 4.50e-04 5glj-a1-m1-cA_5glj-a1-m1-cD, 5glj-a1-m1-cB_5glj-a1-m1-cD
39 5glj-a1-m1-cA 96 88 0.2637 0.2500 0.2727 4.50e-04 5glj-a1-m1-cA_5glj-a1-m1-cD, 5glj-a1-m1-cB_5glj-a1-m1-cA
40 5tyt-a2-m2-cD 89 69 0.2527 0.2584 0.3333 0.001 5tyt-a2-m1-cC_5tyt-a2-m2-cD
41 5tyt-a2-m1-cC 87 69 0.2527 0.2644 0.3333 0.001 5tyt-a2-m1-cC_5tyt-a2-m2-cD
42 7mfw-a2-m2-cB 98 76 0.2308 0.2143 0.2763 0.002 7mfw-a2-m1-cA_7mfw-a2-m2-cB
43 7mfw-a1-m1-cB 98 76 0.2308 0.2143 0.2763 0.002 7mfw-a1-m1-cA_7mfw-a1-m1-cB
44 7mfw-a2-m1-cA 93 73 0.2198 0.2151 0.2740 0.003 7mfw-a2-m1-cA_7mfw-a2-m2-cB
45 7mfw-a1-m1-cA 93 73 0.2198 0.2151 0.2740 0.003 7mfw-a1-m1-cA_7mfw-a1-m1-cB
46 7qsb-a1-m1-cB 80 76 0.2747 0.3125 0.3289 0.004 7qsb-a1-m1-cB_7qsb-a1-m1-cA
47 1pdr-a1-m6-cA 96 74 0.2418 0.2292 0.2973 0.010 1pdr-a1-m2-cA_1pdr-a1-m6-cA, 1pdr-a1-m3-cA_1pdr-a1-m6-cA, 1pdr-a1-m5-cA_1pdr-a1-m6-cA
48 1pdr-a1-m5-cA 96 74 0.2418 0.2292 0.2973 0.010 1pdr-a1-m5-cA_1pdr-a1-m6-cA
49 1pdr-a1-m3-cA 96 74 0.2418 0.2292 0.2973 0.010 1pdr-a1-m3-cA_1pdr-a1-m6-cA
50 1pdr-a1-m2-cA 96 74 0.2418 0.2292 0.2973 0.010 1pdr-a1-m2-cA_1pdr-a1-m6-cA
51 7qsa-a1-m1-cB 78 77 0.2527 0.2949 0.2987 0.030 7qsa-a1-m1-cB_7qsa-a1-m1-cA
52 6nek-a1-m2-cA 86 81 0.2527 0.2674 0.2840 0.035 6nek-a1-m1-cA_6nek-a1-m2-cA
53 6nek-a1-m1-cA 86 81 0.2527 0.2674 0.2840 0.035 6nek-a1-m1-cA_6nek-a1-m2-cA
54 2iwp-a1-m1-cB 106 88 0.2418 0.2075 0.2500 0.050 2iwp-a1-m1-cA_2iwp-a1-m1-cB
55 2z17-a1-m2-cA 94 80 0.2198 0.2128 0.2500 0.052 2z17-a1-m1-cA_2z17-a1-m2-cA
56 2z17-a1-m1-cA 94 80 0.2198 0.2128 0.2500 0.052 2z17-a1-m1-cA_2z17-a1-m2-cA
57 7qsa-a1-m1-cA 85 78 0.2637 0.2824 0.3077 0.072 7qsa-a1-m1-cB_7qsa-a1-m1-cA
58 3ngh-a1-m2-cB 106 80 0.2527 0.2170 0.2875 0.14 3ngh-a1-m1-cA_3ngh-a1-m2-cB
59 3ngh-a1-m1-cA 106 80 0.2527 0.2170 0.2875 0.14 3ngh-a1-m1-cA_3ngh-a1-m2-cB
60 4oeo-a5-m3-cC 94 76 0.2088 0.2021 0.2500 0.17 4oeo-a5-m1-cB_4oeo-a5-m3-cC
61 4oeo-a5-m1-cB 94 76 0.2088 0.2021 0.2500 0.17 4oeo-a5-m1-cB_4oeo-a5-m3-cC
62 2i04-a1-m1-cB 85 61 0.2088 0.2235 0.3115 0.22 2i04-a1-m1-cA_2i04-a1-m1-cB
63 2i04-a1-m1-cA 85 61 0.2088 0.2235 0.3115 0.22 2i04-a1-m1-cA_2i04-a1-m1-cB
64 2h2c-a1-m2-cA 107 76 0.2088 0.1776 0.2500 0.23 2h2c-a1-m1-cA_2h2c-a1-m2-cA
65 2h2c-a1-m1-cA 107 76 0.2088 0.1776 0.2500 0.23 2h2c-a1-m1-cA_2h2c-a1-m2-cA
66 2h2b-a1-m2-cA 107 76 0.2088 0.1776 0.2500 0.25 2h2b-a1-m1-cA_2h2b-a1-m2-cA
67 2h2b-a1-m1-cA 107 76 0.2088 0.1776 0.2500 0.25 2h2b-a1-m1-cA_2h2b-a1-m2-cA
68 3lny-a1-m6-cA 94 73 0.2198 0.2128 0.2740 0.27 3lny-a1-m3-cA_3lny-a1-m6-cA, 3lny-a1-m5-cA_3lny-a1-m6-cA
69 3lny-a1-m5-cA 94 73 0.2198 0.2128 0.2740 0.27 3lny-a1-m5-cA_3lny-a1-m6-cA
70 3lny-a1-m3-cA 94 73 0.2198 0.2128 0.2740 0.27 3lny-a1-m3-cA_3lny-a1-m6-cA
71 4q2q-a1-m2-cA 90 58 0.1978 0.2000 0.3103 0.29 4q2q-a1-m1-cA_4q2q-a1-m2-cA
72 4q2q-a1-m1-cA 90 58 0.1978 0.2000 0.3103 0.29 4q2q-a1-m1-cA_4q2q-a1-m2-cA
73 2iwq-a1-m2-cA 92 62 0.1758 0.1739 0.2581 0.30 2iwq-a1-m1-cA_2iwq-a1-m2-cA
74 2iwq-a1-m1-cA 92 62 0.1758 0.1739 0.2581 0.30 2iwq-a1-m1-cA_2iwq-a1-m2-cA
75 2iwp-a1-m1-cA 92 74 0.2088 0.2065 0.2568 0.48 2iwp-a1-m1-cA_2iwp-a1-m1-cB
76 3tsw-a5-m1-cB 194 58 0.1978 0.0928 0.3103 0.85 3tsw-a5-m1-cB_3tsw-a5-m1-cD
77 1q3p-a2-m2-cA 98 86 0.2418 0.2245 0.2558 0.86 1q3p-a2-m1-cA_1q3p-a2-m2-cA, 1q3p-a2-m2-cA_1q3p-a2-m2-cB
78 1q3p-a2-m1-cA 98 86 0.2418 0.2245 0.2558 0.86 1q3p-a2-m1-cA_1q3p-a2-m2-cA
79 3tsw-a5-m1-cD 199 58 0.1978 0.0905 0.3103 0.88 3tsw-a5-m1-cB_3tsw-a5-m1-cD
80 1q3p-a2-m2-cB 103 86 0.2418 0.2136 0.2558 1.1 1q3p-a2-m1-cB_1q3p-a2-m2-cB, 1q3p-a2-m2-cA_1q3p-a2-m2-cB
81 1q3p-a2-m1-cB 103 86 0.2418 0.2136 0.2558 1.1 1q3p-a2-m1-cB_1q3p-a2-m2-cB
82 4amh-a1-m1-cB 92 69 0.1978 0.1957 0.2609 1.3 4amh-a1-m1-cB_4amh-a1-m1-cA
83 7qcs-a1-m1-cB 98 62 0.2088 0.1939 0.3065 1.3 7qcs-a1-m1-cA_7qcs-a1-m1-cB
84 4amh-a1-m1-cA 94 69 0.1978 0.1915 0.2609 1.3 4amh-a1-m1-cB_4amh-a1-m1-cA
85 6bjo-a1-m1-cA 86 70 0.1978 0.2093 0.2571 1.3 6bjo-a1-m1-cB_6bjo-a1-m1-cA
86 7qcs-a1-m1-cA 97 62 0.2088 0.1959 0.3065 1.4 7qcs-a1-m1-cA_7qcs-a1-m1-cB
87 2x7z-a1-m2-cA 99 69 0.1978 0.1818 0.2609 1.7 2x7z-a1-m1-cA_2x7z-a1-m2-cA
88 2x7z-a1-m1-cA 99 69 0.1978 0.1818 0.2609 1.7 2x7z-a1-m1-cA_2x7z-a1-m2-cA
89 7m4r-a1-m1-cA 360 58 0.2088 0.0528 0.3276 2.0 7m4r-a1-m1-cB_7m4r-a1-m1-cA
90 3hpk-a3-m1-cB 107 70 0.1978 0.1682 0.2571 2.1 3hpk-a3-m1-cB_3hpk-a3-m1-cA
91 3hpk-a3-m1-cA 112 70 0.1978 0.1607 0.2571 2.3 3hpk-a3-m1-cB_3hpk-a3-m1-cA
92 3rl8-a1-m1-cD 94 69 0.1978 0.1915 0.2609 2.8 3rl8-a1-m1-cD_3rl8-a1-m1-cC, 3rl8-a1-m1-cE_3rl8-a1-m1-cD
93 3rl8-a1-m1-cA 94 69 0.1978 0.1915 0.2609 2.8 3rl8-a1-m1-cA_3rl8-a1-m1-cC, 3rl8-a1-m1-cB_3rl8-a1-m1-cA
94 3rl8-a1-m1-cE 90 69 0.1978 0.2000 0.2609 2.9 3rl8-a1-m1-cE_3rl8-a1-m1-cD
95 3rl8-a1-m1-cB 90 69 0.1978 0.2000 0.2609 2.9 3rl8-a1-m1-cB_3rl8-a1-m1-cA, 3rl8-a1-m1-cB_3rl8-a1-m1-cC
96 3rl8-a1-m1-cC 95 69 0.1978 0.1895 0.2609 2.9 3rl8-a1-m1-cA_3rl8-a1-m1-cC, 3rl8-a1-m1-cB_3rl8-a1-m1-cC, 3rl8-a1-m1-cD_3rl8-a1-m1-cC
97 4q2p-a1-m1-cB 87 73 0.2088 0.2184 0.2603 3.6 4q2p-a1-m1-cB_4q2p-a1-m1-cA
98 4q2p-a1-m1-cA 98 73 0.2088 0.1939 0.2603 4.0 4q2p-a1-m1-cB_4q2p-a1-m1-cA, 4q2p-a1-m1-cC_4q2p-a1-m1-cA
99 4q2p-a1-m1-cC 80 65 0.1758 0.2000 0.2462 4.4 4q2p-a1-m1-cC_4q2p-a1-m1-cA
100 2w7r-a1-m1-cB 95 47 0.1868 0.1789 0.3617 4.9 2w7r-a1-m1-cA_2w7r-a1-m1-cB
101 2w7r-a1-m1-cA 95 47 0.1868 0.1789 0.3617 4.9 2w7r-a1-m1-cA_2w7r-a1-m1-cB
102 5tr1-a1-m1-cB 606 57 0.1648 0.0248 0.2632 6.3 5tr1-a1-m1-cA_5tr1-a1-m1-cB
103 5tr1-a1-m1-cA 606 57 0.1648 0.0248 0.2632 6.3 5tr1-a1-m1-cA_5tr1-a1-m1-cB
104 3eh7-a1-m2-cA 389 27 0.0989 0.0231 0.3333 7.2 3eh7-a1-m1-cA_3eh7-a1-m2-cA
105 3eh7-a1-m1-cA 389 27 0.0989 0.0231 0.3333 7.2 3eh7-a1-m1-cA_3eh7-a1-m2-cA
106 2q5j-a1-m2-cA 523 20 0.1209 0.0210 0.5500 7.4 2q5j-a1-m1-cA_2q5j-a1-m2-cA
107 2q5j-a1-m1-cA 523 20 0.1209 0.0210 0.5500 7.4 2q5j-a1-m1-cA_2q5j-a1-m2-cA
108 2q5l-a2-m1-cA 538 20 0.1209 0.0204 0.5500 7.5 2q5l-a2-m1-cB_2q5l-a2-m1-cA
109 2q5q-a1-m1-cA 533 20 0.1209 0.0206 0.5500 7.6 2q5q-a1-m1-cA_2q5q-a1-m2-cB
110 2q5q-a1-m2-cB 535 20 0.1209 0.0206 0.5500 7.6 2q5q-a1-m1-cA_2q5q-a1-m2-cB
111 2q5l-a2-m1-cB 535 20 0.1209 0.0206 0.5500 7.7 2q5l-a2-m1-cB_2q5l-a2-m1-cA

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Reference:
Jacob Schwartz et al.

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