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HomodimerDB
>protein (length=82)
HENDLEAIELARFAVAEHNSKTNAMLEFERLVKVRHQVVAGTMHHFTVQVKEAGGGKKLY
EAKVWEKVWENFKQLQSFQPVG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3ul5-a1-m1-cA 82 82 1.0000 1.0000 1.0000 2.86e-56 3ul5-a1-m1-cB_3ul5-a1-m1-cA
2 3ul5-a1-m1-cB 81 81 0.9878 1.0000 1.0000 2.14e-55 3ul5-a1-m1-cB_3ul5-a1-m1-cA
3 4tx4-a1-m1-cA 83 80 0.5854 0.5783 0.6000 1.38e-27 4tx4-a1-m1-cB_4tx4-a1-m1-cA
4 4tx4-a1-m1-cB 79 78 0.5732 0.5949 0.6026 1.06e-26 4tx4-a1-m1-cB_4tx4-a1-m1-cA
5 6vlp-a1-m2-cA 80 73 0.4878 0.5000 0.5479 2.36e-24 6vlp-a1-m1-cA_6vlp-a1-m2-cA
6 6vlp-a1-m1-cA 80 73 0.4878 0.5000 0.5479 2.36e-24 6vlp-a1-m1-cA_6vlp-a1-m2-cA
7 5ohv-a1-m1-cD 90 91 0.5976 0.5444 0.5385 2.34e-22 5ohv-a1-m1-cB_5ohv-a1-m1-cD
8 5a0o-a1-m1-cS 93 92 0.5854 0.5161 0.5217 6.93e-22 5a0o-a1-m1-cB_5a0o-a1-m1-cS
9 5a0o-a1-m1-cB 93 92 0.5854 0.5161 0.5217 6.93e-22 5a0o-a1-m1-cB_5a0o-a1-m1-cS
10 5ohv-a1-m1-cB 89 90 0.5854 0.5393 0.5333 9.85e-22 5ohv-a1-m1-cB_5ohv-a1-m1-cD
11 5ohl-a4-m1-cE 89 90 0.5732 0.5281 0.5222 5.61e-21 5ohl-a4-m1-cB_5ohl-a4-m1-cE
12 5ohl-a4-m1-cB 89 90 0.5732 0.5281 0.5222 5.61e-21 5ohl-a4-m1-cB_5ohl-a4-m1-cE
13 7c03-a2-m2-cA 312 88 0.4634 0.1218 0.4318 1.93e-10 7c03-a2-m1-cA_7c03-a2-m2-cA
14 7c03-a2-m1-cA 312 88 0.4634 0.1218 0.4318 1.93e-10 7c03-a2-m1-cA_7c03-a2-m2-cA
15 5kux-a2-m2-cA 92 78 0.3049 0.2717 0.3205 3.60e-04 5kux-a2-m1-cA_5kux-a2-m2-cA
16 5kux-a2-m1-cA 92 78 0.3049 0.2717 0.3205 3.60e-04 5kux-a2-m1-cA_5kux-a2-m2-cA
17 4zm8-a2-m1-cD 109 56 0.2195 0.1651 0.3214 0.087 4zm8-a2-m1-cC_4zm8-a2-m1-cD
18 4zm8-a2-m1-cC 109 56 0.2195 0.1651 0.3214 0.090 4zm8-a2-m1-cC_4zm8-a2-m1-cD
19 2ch9-a1-m2-cA 126 57 0.1951 0.1270 0.2807 0.12 2ch9-a1-m1-cA_2ch9-a1-m2-cA
20 2ch9-a1-m1-cA 126 57 0.1951 0.1270 0.2807 0.12 2ch9-a1-m1-cA_2ch9-a1-m2-cA
21 3qrd-a3-m2-cB 104 40 0.1951 0.1538 0.4000 0.14 3qrd-a3-m2-cB_3qrd-a3-m2-cA, 3qrd-a3-m2-cB_3qrd-a3-m4-cC
22 3qrd-a3-m4-cD 111 40 0.1951 0.1441 0.4000 0.16 3qrd-a3-m1-cA_3qrd-a3-m4-cD, 3qrd-a3-m4-cC_3qrd-a3-m4-cD
23 3qrd-a3-m2-cA 111 40 0.1951 0.1441 0.4000 0.16 3qrd-a3-m2-cB_3qrd-a3-m2-cA
24 3qrd-a3-m1-cA 111 40 0.1951 0.1441 0.4000 0.16 3qrd-a3-m1-cA_3qrd-a3-m4-cD
25 3qrd-a3-m4-cC 108 40 0.1951 0.1481 0.4000 0.18 3qrd-a3-m2-cB_3qrd-a3-m4-cC, 3qrd-a3-m4-cC_3qrd-a3-m4-cD
26 1r4c-a8-m5-cH 110 40 0.1829 0.1364 0.3750 0.38 1r4c-a8-m1-cC_1r4c-a8-m5-cH, 1r4c-a8-m1-cD_1r4c-a8-m5-cH
27 1r4c-a8-m5-cG 110 40 0.1829 0.1364 0.3750 0.38 1r4c-a8-m1-cD_1r4c-a8-m5-cG
28 1r4c-a8-m1-cD 110 40 0.1829 0.1364 0.3750 0.38 1r4c-a8-m1-cD_1r4c-a8-m5-cG, 1r4c-a8-m1-cD_1r4c-a8-m5-cH
29 1r4c-a8-m1-cC 110 40 0.1829 0.1364 0.3750 0.38 1r4c-a8-m1-cC_1r4c-a8-m5-cH
30 1tij-a1-m1-cA 114 40 0.1829 0.1316 0.3750 0.41 1tij-a1-m1-cB_1tij-a1-m1-cA
31 1tij-a1-m1-cB 112 40 0.1829 0.1339 0.3750 0.43 1tij-a1-m1-cB_1tij-a1-m1-cA
32 2nyt-a1-m1-cD 179 32 0.1585 0.0726 0.4062 1.4 2nyt-a1-m1-cD_2nyt-a1-m1-cC
33 3sva-a2-m8-cA 111 40 0.1707 0.1261 0.3500 3.4 3sva-a2-m2-cA_3sva-a2-m8-cA, 3sva-a2-m3-cA_3sva-a2-m8-cA, 3sva-a2-m4-cA_3sva-a2-m8-cA, 3sva-a2-m7-cA_3sva-a2-m8-cA
34 3sva-a2-m7-cA 111 40 0.1707 0.1261 0.3500 3.4 3sva-a2-m7-cA_3sva-a2-m8-cA
35 3sva-a2-m4-cA 111 40 0.1707 0.1261 0.3500 3.4 3sva-a2-m4-cA_3sva-a2-m8-cA
36 3sva-a2-m3-cA 111 40 0.1707 0.1261 0.3500 3.4 3sva-a2-m3-cA_3sva-a2-m8-cA
37 3sva-a2-m2-cA 111 40 0.1707 0.1261 0.3500 3.4 3sva-a2-m2-cA_3sva-a2-m8-cA

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Reference:
Jacob Schwartz et al.

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