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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=93)
HFHYTVTDIKDLTKLGAIYDKTKKYWVYQGKPVMPDQFTFELLDFLHQLTHLSFSKMKAL
LERSHSPYYMLNRDRTLKNITETCKACAQVNAS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4nzg-a2-m1-cC 93 93 1.0000 1.0000 1.0000 2.50e-67 4nzg-a2-m1-cA_4nzg-a2-m1-cC
2 4nzg-a2-m1-cA 93 93 1.0000 1.0000 1.0000 2.50e-67 4nzg-a2-m1-cA_4nzg-a2-m1-cC
3 3nnq-a1-m2-cB 92 93 0.9677 0.9783 0.9677 3.35e-59 3nnq-a1-m1-cA_3nnq-a1-m2-cB, 3nnq-a1-m2-cA_3nnq-a1-m2-cB
4 3nnq-a1-m2-cA 92 93 0.9677 0.9783 0.9677 3.35e-59 3nnq-a1-m2-cA_3nnq-a1-m2-cB
5 3nnq-a1-m1-cA 92 93 0.9677 0.9783 0.9677 3.35e-59 3nnq-a1-m1-cA_3nnq-a1-m2-cB
6 2nvw-a3-m3-cB 405 42 0.1290 0.0296 0.2857 0.40 2nvw-a3-m1-cB_2nvw-a3-m3-cB, 2nvw-a3-m3-cB_2nvw-a3-m3-cA
7 2nvw-a3-m1-cB 405 42 0.1290 0.0296 0.2857 0.40 2nvw-a3-m1-cB_2nvw-a3-m3-cB
8 2nvw-a3-m3-cA 413 42 0.1290 0.0291 0.2857 1.8 2nvw-a3-m3-cB_2nvw-a3-m3-cA
9 8d88-a1-m1-cB 461 46 0.1505 0.0304 0.3043 3.3 8d88-a1-m1-cA_8d88-a1-m1-cB
10 8d88-a1-m1-cA 461 46 0.1505 0.0304 0.3043 3.3 8d88-a1-m1-cA_8d88-a1-m1-cB
11 5dv5-a1-m1-cB 267 75 0.2366 0.0824 0.2933 4.2 5dv5-a1-m1-cA_5dv5-a1-m1-cB
12 5dv5-a1-m1-cA 267 75 0.2366 0.0824 0.2933 4.2 5dv5-a1-m1-cA_5dv5-a1-m1-cB
13 5xgf-a1-m2-cA 271 75 0.2366 0.0812 0.2933 4.4 5xgf-a1-m1-cA_5xgf-a1-m2-cA
14 5xgf-a1-m1-cA 271 75 0.2366 0.0812 0.2933 4.4 5xgf-a1-m1-cA_5xgf-a1-m2-cA
15 1mus-a1-m2-cA 458 39 0.1290 0.0262 0.3077 5.9 1mus-a1-m1-cA_1mus-a1-m2-cA
16 1mus-a1-m1-cA 458 39 0.1290 0.0262 0.3077 5.9 1mus-a1-m1-cA_1mus-a1-m2-cA
17 5aa5-a1-m1-cM 345 24 0.1290 0.0348 0.5000 6.8 5aa5-a1-m1-cD_5aa5-a1-m1-cM, 5aa5-a1-m1-cF_5aa5-a1-m1-cM, 5aa5-a1-m1-cH_5aa5-a1-m1-cM
18 5aa5-a1-m1-cH 345 24 0.1290 0.0348 0.5000 6.8 5aa5-a1-m1-cH_5aa5-a1-m1-cM
19 5aa5-a1-m1-cF 345 24 0.1290 0.0348 0.5000 6.8 5aa5-a1-m1-cF_5aa5-a1-m1-cM
20 5aa5-a1-m1-cD 345 24 0.1290 0.0348 0.5000 6.8 5aa5-a1-m1-cD_5aa5-a1-m1-cM
21 3uk6-a2-m1-cG 330 58 0.1613 0.0455 0.2586 9.7 3uk6-a2-m1-cH_3uk6-a2-m1-cG

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Reference:
Jacob Schwartz et al.

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