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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=90)
HGTSLTDEELVTSVRELNQHLRGLSKEEIIQLKQRRRTLKNRGYAASCRVKRVTQKEELE
KQKAELQQEVEKLASENASKLELDALRSKY

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3a5t-a2-m1-cA 90 90 1.0000 1.0000 1.0000 4.87e-59 3a5t-a2-m1-cA_3a5t-a2-m1-cB
2 3a5t-a2-m1-cB 90 89 0.9889 0.9889 1.0000 8.01e-58 3a5t-a2-m1-cA_3a5t-a2-m1-cB
3 4auw-a1-m1-cA 87 87 0.5778 0.5977 0.5977 2.86e-26 4auw-a1-m1-cB_4auw-a1-m1-cA
4 4auw-a1-m1-cB 85 86 0.5778 0.6118 0.6047 5.63e-26 4auw-a1-m1-cB_4auw-a1-m1-cA
5 4eot-a1-m1-cB 92 73 0.5111 0.5000 0.6301 6.10e-25 4eot-a1-m1-cA_4eot-a1-m1-cB
6 4eot-a1-m1-cA 92 73 0.5111 0.5000 0.6301 6.44e-25 4eot-a1-m1-cA_4eot-a1-m1-cB
7 7ehl-a1-m1-cB 563 82 0.2556 0.0409 0.2805 2.9 7ehl-a1-m1-cA_7ehl-a1-m1-cB
8 7ehl-a1-m1-cA 563 82 0.2556 0.0409 0.2805 2.9 7ehl-a1-m1-cA_7ehl-a1-m1-cB
9 3uk2-a1-m1-cB 280 93 0.2667 0.0857 0.2581 3.1 3uk2-a1-m1-cA_3uk2-a1-m1-cB
10 3uk2-a1-m1-cA 280 93 0.2667 0.0857 0.2581 3.1 3uk2-a1-m1-cA_3uk2-a1-m1-cB
11 4nqf-a1-m2-cB 148 78 0.3000 0.1824 0.3462 8.5 4nqf-a1-m1-cA_4nqf-a1-m2-cB

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Reference:
Jacob Schwartz et al.

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