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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=91)
HGYHKQKAEHLKRLRRIEGQIRGLQRMVDEDVYCIDILTQVSASTKALQSFALQLLEEHL
RHCVADAALKGGTEIDAKVEEATKAIGRLLR

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4uig-a1-m4-cA 91 91 1.0000 1.0000 1.0000 1.33e-61 4uig-a1-m3-cA_4uig-a1-m4-cA
2 4uig-a1-m3-cA 91 91 1.0000 1.0000 1.0000 1.33e-61 4uig-a1-m3-cA_4uig-a1-m4-cA
3 4adz-a1-m2-cB 90 89 0.9780 0.9889 1.0000 7.52e-60 4adz-a1-m2-cA_4adz-a1-m2-cB
4 4adz-a1-m2-cA 90 89 0.9780 0.9889 1.0000 7.52e-60 4adz-a1-m2-cA_4adz-a1-m2-cB
5 4m1p-a2-m9-cA 96 64 0.3956 0.3750 0.5625 9.13e-21 4m1p-a2-m12-cA_4m1p-a2-m9-cA
6 4m1p-a2-m12-cA 96 64 0.3956 0.3750 0.5625 9.13e-21 4m1p-a2-m12-cA_4m1p-a2-m9-cA
7 4m1p-a1-m4-cA 96 64 0.3956 0.3750 0.5625 9.13e-21 4m1p-a1-m3-cA_4m1p-a1-m4-cA
8 4m1p-a1-m3-cA 96 64 0.3956 0.3750 0.5625 9.13e-21 4m1p-a1-m3-cA_4m1p-a1-m4-cA
9 5fmn-a1-m2-cB 89 80 0.3407 0.3483 0.3875 3.03e-12 5fmn-a1-m1-cA_5fmn-a1-m2-cB, 5fmn-a1-m2-cA_5fmn-a1-m2-cB
10 5fmn-a1-m2-cA 86 80 0.3407 0.3605 0.3875 3.91e-12 5fmn-a1-m2-cA_5fmn-a1-m2-cB
11 5fmn-a1-m1-cA 86 80 0.3407 0.3605 0.3875 3.91e-12 5fmn-a1-m1-cA_5fmn-a1-m2-cB
12 2hh7-a2-m4-cA 85 76 0.2857 0.3059 0.3421 6.42e-11 2hh7-a2-m1-cA_2hh7-a2-m4-cA, 2hh7-a2-m3-cA_2hh7-a2-m4-cA
13 2hh7-a2-m3-cA 85 76 0.2857 0.3059 0.3421 6.42e-11 2hh7-a2-m3-cA_2hh7-a2-m4-cA
14 2hh7-a2-m1-cA 85 76 0.2857 0.3059 0.3421 6.42e-11 2hh7-a2-m1-cA_2hh7-a2-m4-cA
15 6ahx-a1-m2-cA 60 60 0.2527 0.3833 0.3833 3.27e-08 6ahx-a1-m1-cA_6ahx-a1-m2-cA
16 6ahx-a1-m1-cA 60 60 0.2527 0.3833 0.3833 3.27e-08 6ahx-a1-m1-cA_6ahx-a1-m2-cA
17 5lcy-a1-m1-cD 88 81 0.2967 0.3068 0.3333 1.52e-05 5lcy-a1-m1-cA_5lcy-a1-m1-cD, 5lcy-a1-m1-cC_5lcy-a1-m1-cD
18 5lcy-a1-m1-cC 88 81 0.2967 0.3068 0.3333 1.52e-05 5lcy-a1-m1-cC_5lcy-a1-m1-cD
19 5lcy-a1-m1-cA 88 81 0.2967 0.3068 0.3333 1.52e-05 5lcy-a1-m1-cA_5lcy-a1-m1-cD
20 5lbm-a1-m1-cD 89 58 0.2527 0.2584 0.3966 2.05e-05 5lbm-a1-m1-cA_5lbm-a1-m1-cD, 5lbm-a1-m1-cB_5lbm-a1-m1-cD, 5lbm-a1-m1-cC_5lbm-a1-m1-cD
21 5lbm-a1-m1-cC 89 58 0.2527 0.2584 0.3966 2.05e-05 5lbm-a1-m1-cC_5lbm-a1-m1-cD
22 5lbm-a1-m1-cB 82 52 0.2418 0.2683 0.4231 4.94e-05 5lbm-a1-m1-cA_5lbm-a1-m1-cB, 5lbm-a1-m1-cB_5lbm-a1-m1-cD
23 5lbm-a1-m1-cA 82 52 0.2418 0.2683 0.4231 4.94e-05 5lbm-a1-m1-cA_5lbm-a1-m1-cB, 5lbm-a1-m1-cA_5lbm-a1-m1-cD
24 7msk-a1-m1-cA 421 63 0.1758 0.0380 0.2540 0.54 7msk-a1-m1-cA_7msk-a1-m1-cB
25 7msk-a1-m1-cB 421 63 0.1758 0.0380 0.2540 0.57 7msk-a1-m1-cA_7msk-a1-m1-cB
26 4e3x-a1-m1-cA 543 68 0.2308 0.0387 0.3088 2.5 4e3x-a1-m1-cA_4e3x-a1-m1-cB
27 4e3x-a1-m1-cB 546 68 0.2308 0.0385 0.3088 2.5 4e3x-a1-m1-cA_4e3x-a1-m1-cB
28 4p72-a1-m1-cB 791 34 0.1538 0.0177 0.4118 3.3 4p72-a1-m1-cA_4p72-a1-m1-cB
29 4p72-a1-m1-cA 791 34 0.1538 0.0177 0.4118 3.3 4p72-a1-m1-cA_4p72-a1-m1-cB
30 4fir-a1-m1-cE 333 27 0.1099 0.0300 0.3704 3.8 4fir-a1-m1-cD_4fir-a1-m1-cE
31 4fir-a1-m1-cD 333 27 0.1099 0.0300 0.3704 3.8 4fir-a1-m1-cD_4fir-a1-m1-cE
32 3uca-a1-m1-cB 269 24 0.0989 0.0335 0.3750 4.5 3uca-a1-m1-cB_3uca-a1-m1-cA
33 2yzr-a1-m4-cC 298 27 0.1209 0.0369 0.4074 6.5 2yzr-a1-m4-cC_2yzr-a1-m4-cA, 2yzr-a1-m4-cC_2yzr-a1-m4-cB
34 2yzr-a1-m4-cB 299 27 0.1209 0.0368 0.4074 6.5 2yzr-a1-m4-cC_2yzr-a1-m4-cB
35 2yzr-a1-m4-cA 307 27 0.1209 0.0358 0.4074 6.5 2yzr-a1-m4-cC_2yzr-a1-m4-cA
36 6et9-a1-m1-cC 389 56 0.1978 0.0463 0.3214 7.1 6et9-a1-m1-cC_6et9-a1-m1-cA
37 6et9-a1-m1-cA 392 56 0.1978 0.0459 0.3214 7.2 6et9-a1-m1-cC_6et9-a1-m1-cA
38 2h4m-a1-m1-cB 810 63 0.2088 0.0235 0.3016 8.6 2h4m-a1-m1-cB_2h4m-a1-m1-cA
39 2h4m-a1-m1-cA 827 63 0.2088 0.0230 0.3016 8.6 2h4m-a1-m1-cB_2h4m-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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