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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=57)
HHEPGDLRHDLNQQERATLSSNVQRFFIGHGSLTADAGGLTYTVSWVPTKQIQRKVA

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2i9f-a2-m2-cB 57 57 1.0000 1.0000 1.0000 2.35e-38 2i9f-a2-m2-cC_2i9f-a2-m2-cB
2 2i9f-a2-m2-cD 58 57 1.0000 0.9828 1.0000 2.81e-38 2i9f-a2-m2-cC_2i9f-a2-m2-cD
3 2i9f-a2-m2-cA 58 57 1.0000 0.9828 1.0000 2.81e-38 2i9f-a2-m2-cC_2i9f-a2-m2-cA
4 2i9f-a2-m2-cC 54 54 0.9474 1.0000 1.0000 1.14e-35 2i9f-a2-m2-cC_2i9f-a2-m2-cA, 2i9f-a2-m2-cC_2i9f-a2-m2-cB, 2i9f-a2-m2-cC_2i9f-a2-m2-cD
5 5e6s-a4-m3-cC 578 27 0.2456 0.0242 0.5185 0.083 5e6s-a4-m1-cA_5e6s-a4-m3-cC, 5e6s-a4-m3-cC_5e6s-a4-m2-cE
6 5e6s-a4-m2-cE 580 27 0.2456 0.0241 0.5185 0.083 5e6s-a4-m3-cC_5e6s-a4-m2-cE
7 5e6s-a4-m1-cA 578 27 0.2456 0.0242 0.5185 0.084 5e6s-a4-m1-cA_5e6s-a4-m3-cC
8 5ifz-a1-m1-cA 118 23 0.1930 0.0932 0.4783 5.7 5ifz-a1-m1-cB_5ifz-a1-m1-cA
9 5ifz-a1-m1-cB 117 23 0.1930 0.0940 0.4783 5.8 5ifz-a1-m1-cB_5ifz-a1-m1-cA
10 7v4e-a1-m1-cD 374 22 0.1579 0.0241 0.4091 6.8 7v4e-a1-m1-cA_7v4e-a1-m1-cD
11 7v4e-a1-m1-cA 374 22 0.1579 0.0241 0.4091 6.8 7v4e-a1-m1-cA_7v4e-a1-m1-cD

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Reference:
Jacob Schwartz et al.

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