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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=62)
HHEPLTPADVHNVAFSKPPIGKRGYNEDEVDAFLDLVENELTRLIEENSDLRQRINELDQ
EL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6lfa-a1-m2-cB 62 62 1.0000 1.0000 1.0000 1.90e-40 6lfa-a1-m1-cB_6lfa-a1-m2-cB, 6lfa-a1-m2-cB_6lfa-a1-m2-cA
2 6lfa-a1-m1-cB 62 62 1.0000 1.0000 1.0000 1.90e-40 6lfa-a1-m1-cB_6lfa-a1-m2-cB
3 6lfa-a1-m2-cA 70 68 1.0000 0.8857 0.9118 1.12e-37 6lfa-a1-m1-cA_6lfa-a1-m2-cA, 6lfa-a1-m2-cB_6lfa-a1-m2-cA
4 6lfa-a1-m1-cA 70 68 1.0000 0.8857 0.9118 1.12e-37 6lfa-a1-m1-cA_6lfa-a1-m2-cA
5 2wuj-a1-m1-cB 50 53 0.3387 0.4200 0.3962 4.63e-07 2wuj-a1-m1-cA_2wuj-a1-m1-cB
6 2wuj-a1-m1-cA 50 53 0.3387 0.4200 0.3962 4.63e-07 2wuj-a1-m1-cA_2wuj-a1-m1-cB
7 6gp7-a1-m1-cA 58 41 0.2581 0.2759 0.3902 0.016 6gp7-a1-m1-cA_6gp7-a1-m1-cB
8 6gp7-a1-m1-cB 59 41 0.2581 0.2712 0.3902 0.018 6gp7-a1-m1-cA_6gp7-a1-m1-cB
9 6gqa-a1-m1-cB 60 40 0.2903 0.3000 0.4500 0.042 6gqa-a1-m1-cC_6gqa-a1-m1-cB
10 4ug1-a1-m1-cB 73 42 0.2581 0.2192 0.3810 0.15 4ug1-a1-m1-cA_4ug1-a1-m1-cB
11 4ug1-a1-m1-cA 70 42 0.2581 0.2286 0.3810 0.18 4ug1-a1-m1-cA_4ug1-a1-m1-cB
12 6gqa-a1-m1-cD 58 39 0.2742 0.2931 0.4359 0.18 6gqa-a1-m1-cC_6gqa-a1-m1-cD
13 6gqa-a1-m1-cC 58 39 0.2742 0.2931 0.4359 0.18 6gqa-a1-m1-cC_6gqa-a1-m1-cB, 6gqa-a1-m1-cC_6gqa-a1-m1-cD
14 3q09-a4-m1-cT 241 51 0.2903 0.0747 0.3529 0.26 3q09-a4-m1-cQ_3q09-a4-m1-cT
15 3q09-a4-m1-cQ 241 51 0.2903 0.0747 0.3529 0.26 3q09-a4-m1-cQ_3q09-a4-m1-cT
16 7o39-a1-m1-cB 51 53 0.2903 0.3529 0.3396 0.28 7o39-a1-m1-cA_7o39-a1-m1-cB
17 7o39-a1-m1-cA 51 53 0.2903 0.3529 0.3396 0.28 7o39-a1-m1-cA_7o39-a1-m1-cB
18 7pax-a1-m2-cA 327 28 0.1613 0.0306 0.3571 1.1 7pax-a1-m1-cA_7pax-a1-m2-cA
19 7pax-a1-m1-cA 327 28 0.1613 0.0306 0.3571 1.1 7pax-a1-m1-cA_7pax-a1-m2-cA
20 5c9n-a1-m1-cB 61 44 0.2258 0.2295 0.3182 1.2 5c9n-a1-m1-cB_5c9n-a1-m1-cA
21 5c9n-a1-m1-cA 64 44 0.2258 0.2188 0.3182 1.4 5c9n-a1-m1-cB_5c9n-a1-m1-cA
22 8d8p-a1-m1-cB 420 30 0.1774 0.0262 0.3667 5.4 8d8p-a1-m1-cA_8d8p-a1-m1-cB
23 8d8p-a1-m1-cA 420 30 0.1774 0.0262 0.3667 5.4 8d8p-a1-m1-cA_8d8p-a1-m1-cB
24 3hq2-a2-m2-cB 497 30 0.2097 0.0262 0.4333 7.4 3hq2-a2-m2-cA_3hq2-a2-m2-cB
25 3hq2-a2-m2-cA 496 30 0.2097 0.0262 0.4333 7.6 3hq2-a2-m1-cA_3hq2-a2-m2-cA, 3hq2-a2-m2-cA_3hq2-a2-m2-cB
26 3hq2-a2-m1-cA 496 30 0.2097 0.0262 0.4333 7.6 3hq2-a2-m1-cA_3hq2-a2-m2-cA
27 1bg1-a1-m2-cA 558 27 0.1774 0.0197 0.4074 9.5 1bg1-a1-m1-cA_1bg1-a1-m2-cA
28 1bg1-a1-m1-cA 558 27 0.1774 0.0197 0.4074 9.5 1bg1-a1-m1-cA_1bg1-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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