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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=80)
HHHHARATGKTFRSGNSEAVRLPRDLAFGADVELTLIRSGDVLTIYPSKGSIADLVATLN
QPRPDSVEIRDEDLFPERPG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5l6l-a1-m1-cH 80 80 1.0000 1.0000 1.0000 2.05e-54 5l6l-a1-m1-cE_5l6l-a1-m1-cH
2 5k8j-a1-m2-cA 79 78 0.9750 0.9873 1.0000 2.10e-52 5k8j-a1-m1-cA_5k8j-a1-m2-cA
3 5k8j-a1-m1-cA 79 78 0.9750 0.9873 1.0000 2.10e-52 5k8j-a1-m1-cA_5k8j-a1-m2-cA
4 5l6l-a1-m1-cE 63 63 0.7875 1.0000 1.0000 8.71e-41 5l6l-a1-m1-cE_5l6l-a1-m1-cH
5 3zvk-a1-m1-cH 57 51 0.2000 0.2807 0.3137 0.006 3zvk-a1-m1-cE_3zvk-a1-m1-cH
6 3zvk-a1-m1-cE 57 51 0.2000 0.2807 0.3137 0.006 3zvk-a1-m1-cE_3zvk-a1-m1-cH
7 6ifm-a1-m1-cH 68 62 0.2375 0.2794 0.3065 0.23 6ifm-a1-m1-cB_6ifm-a1-m1-cH
8 6ifm-a1-m1-cB 68 62 0.2375 0.2794 0.3065 0.23 6ifm-a1-m1-cB_6ifm-a1-m1-cH
9 3cq5-a2-m2-cC 364 34 0.1875 0.0412 0.4412 0.55 3cq5-a2-m1-cC_3cq5-a2-m2-cC
10 3cq5-a2-m1-cC 364 34 0.1875 0.0412 0.4412 0.55 3cq5-a2-m1-cC_3cq5-a2-m2-cC
11 7dxe-a1-m1-cD 685 50 0.2000 0.0234 0.3200 3.9 7dxe-a1-m1-cB_7dxe-a1-m1-cD
12 7dxe-a1-m1-cB 685 50 0.2000 0.0234 0.3200 3.9 7dxe-a1-m1-cB_7dxe-a1-m1-cD
13 5hy5-a1-m1-cA 511 50 0.1625 0.0254 0.2600 6.5 5hy5-a1-m1-cB_5hy5-a1-m1-cA
14 1dxx-a2-m1-cD 238 29 0.1625 0.0546 0.4483 6.8 1dxx-a2-m1-cC_1dxx-a2-m1-cD
15 1dxx-a2-m1-cC 238 29 0.1625 0.0546 0.4483 6.8 1dxx-a2-m1-cC_1dxx-a2-m1-cD
16 5hy5-a1-m1-cB 490 50 0.1625 0.0265 0.2600 6.9 5hy5-a1-m1-cB_5hy5-a1-m1-cA
17 1sgj-a1-m1-cC 231 29 0.1625 0.0563 0.4483 8.8 1sgj-a1-m1-cB_1sgj-a1-m1-cC
18 1sgj-a1-m1-cB 231 29 0.1625 0.0563 0.4483 8.8 1sgj-a1-m1-cB_1sgj-a1-m1-cC

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Reference:
Jacob Schwartz et al.

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