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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=93)
HHHHDALGLIETKGLVACIAAADAMCASANVELIGYENIGSGLVTVMVKGDVGAVKASVD
SGLESAQHIGEVVTSLVIARPHNDINKIVIKHK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7mgp-a1-m6-cA 93 93 1.0000 1.0000 1.0000 9.10e-62 7mgp-a1-m2-cA_7mgp-a1-m6-cA
2 7mgp-a1-m2-cA 93 93 1.0000 1.0000 1.0000 9.10e-62 7mgp-a1-m2-cA_7mgp-a1-m6-cA
3 5d6v-a1-m6-cA 90 88 0.6237 0.6444 0.6591 1.22e-29 5d6v-a1-m2-cA_5d6v-a1-m6-cA
4 5d6v-a1-m2-cA 90 88 0.6237 0.6444 0.6591 1.22e-29 5d6v-a1-m2-cA_5d6v-a1-m6-cA
5 4axj-a1-m2-cC 86 85 0.5269 0.5698 0.5765 7.02e-26 4axj-a1-m2-cC_4axj-a1-m1-cA
6 4axj-a1-m1-cA 87 85 0.5269 0.5632 0.5765 7.13e-26 4axj-a1-m2-cC_4axj-a1-m1-cA
7 3ssq-a1-m2-cC 100 86 0.4731 0.4400 0.5116 1.65e-25 3ssq-a1-m1-cC_3ssq-a1-m2-cC
8 3ssq-a1-m1-cC 100 86 0.4731 0.4400 0.5116 1.65e-25 3ssq-a1-m1-cC_3ssq-a1-m2-cC
9 7mmx-a2-m3-cF 85 85 0.5484 0.6000 0.6000 4.49e-25 7mmx-a2-m3-cF_7mmx-a2-m1-cD
10 7mmx-a2-m1-cD 86 85 0.5484 0.5930 0.6000 4.51e-25 7mmx-a2-m3-cF_7mmx-a2-m1-cD
11 3dnc-a1-m6-cA 90 86 0.4624 0.4778 0.5000 4.51e-25 3dnc-a1-m2-cA_3dnc-a1-m6-cA
12 3dnc-a1-m2-cA 90 86 0.4624 0.4778 0.5000 4.51e-25 3dnc-a1-m2-cA_3dnc-a1-m6-cA
13 6owg-a1-m1-cDA 100 86 0.4516 0.4200 0.4884 9.76e-24 6owg-a1-m1-cC8_6owg-a1-m1-cDA
14 6owg-a1-m1-cC8 100 86 0.4516 0.4200 0.4884 9.76e-24 6owg-a1-m1-cC8_6owg-a1-m1-cDA
15 6owf-a1-m1-cW 100 86 0.4516 0.4200 0.4884 9.76e-24 6owf-a1-m1-cA6_6owf-a1-m1-cW
16 6owf-a1-m1-cA6 100 86 0.4516 0.4200 0.4884 9.76e-24 6owf-a1-m1-cA6_6owf-a1-m1-cW
17 3mpy-a1-m6-cA 96 84 0.4946 0.4792 0.5476 2.06e-22 3mpy-a1-m2-cA_3mpy-a1-m6-cA
18 3mpy-a1-m2-cA 96 84 0.4946 0.4792 0.5476 2.06e-22 3mpy-a1-m2-cA_3mpy-a1-m6-cA
19 2ewh-a1-m6-cA 92 87 0.4301 0.4348 0.4598 1.31e-20 2ewh-a1-m2-cA_2ewh-a1-m6-cA
20 2ewh-a1-m2-cA 92 87 0.4301 0.4348 0.4598 1.31e-20 2ewh-a1-m2-cA_2ewh-a1-m6-cA
21 7ckc-a1-m1-cCz 89 87 0.4301 0.4494 0.4598 1.49e-20 7ckc-a1-m1-cBi_7ckc-a1-m1-cCz
22 7ckc-a1-m1-cBi 89 87 0.4301 0.4494 0.4598 1.49e-20 7ckc-a1-m1-cBi_7ckc-a1-m1-cCz
23 4ox6-a1-m3-cA 103 88 0.3333 0.3010 0.3523 2.70e-16 4ox6-a1-m3-cB_4ox6-a1-m3-cA
24 4ox6-a1-m3-cB 93 87 0.3333 0.3333 0.3563 6.80e-16 4ox6-a1-m3-cB_4ox6-a1-m3-cA
25 2a10-a1-m1-cE 102 84 0.3118 0.2843 0.3452 2.32e-12 2a10-a1-m1-cD_2a10-a1-m1-cE
26 2a10-a1-m1-cD 102 84 0.3118 0.2843 0.3452 2.32e-12 2a10-a1-m1-cD_2a10-a1-m1-cE
27 3pac-a1-m3-cA 183 92 0.3441 0.1749 0.3478 2.10e-06 3pac-a1-m2-cA_3pac-a1-m3-cA
28 3pac-a1-m3-cA 183 81 0.3011 0.1530 0.3457 6.58e-06 3pac-a1-m2-cA_3pac-a1-m3-cA
29 3pac-a1-m2-cA 183 92 0.3441 0.1749 0.3478 2.10e-06 3pac-a1-m2-cA_3pac-a1-m3-cA
30 3pac-a1-m2-cA 183 81 0.3011 0.1530 0.3457 6.58e-06 3pac-a1-m2-cA_3pac-a1-m3-cA
31 3nwg-a2-m3-cA 174 84 0.3011 0.1609 0.3333 3.41e-04 3nwg-a2-m2-cA_3nwg-a2-m3-cA
32 3nwg-a2-m3-cA 174 65 0.2473 0.1322 0.3538 0.001 3nwg-a2-m2-cA_3nwg-a2-m3-cA
33 3nwg-a2-m2-cA 174 84 0.3011 0.1609 0.3333 3.41e-04 3nwg-a2-m2-cA_3nwg-a2-m3-cA
34 3nwg-a2-m2-cA 174 65 0.2473 0.1322 0.3538 0.001 3nwg-a2-m2-cA_3nwg-a2-m3-cA
35 3nwg-a1-m6-cA 174 84 0.3011 0.1609 0.3333 3.41e-04 3nwg-a1-m1-cA_3nwg-a1-m6-cA, 3nwg-a1-m3-cA_3nwg-a1-m6-cA
36 3nwg-a1-m6-cA 174 65 0.2473 0.1322 0.3538 0.001 3nwg-a1-m1-cA_3nwg-a1-m6-cA, 3nwg-a1-m3-cA_3nwg-a1-m6-cA
37 3nwg-a1-m3-cA 174 84 0.3011 0.1609 0.3333 3.41e-04 3nwg-a1-m3-cA_3nwg-a1-m6-cA
38 3nwg-a1-m3-cA 174 65 0.2473 0.1322 0.3538 0.001 3nwg-a1-m3-cA_3nwg-a1-m6-cA
39 3nwg-a1-m1-cA 174 84 0.3011 0.1609 0.3333 3.41e-04 3nwg-a1-m1-cA_3nwg-a1-m6-cA
40 3nwg-a1-m1-cA 174 65 0.2473 0.1322 0.3538 0.001 3nwg-a1-m1-cA_3nwg-a1-m6-cA
41 4axi-a1-m3-cB 115 62 0.2258 0.1826 0.3387 0.037 4axi-a1-m3-cB_4axi-a1-m2-cA, 4axi-a1-m3-cB_4axi-a1-m3-cA
42 4axi-a1-m3-cA 116 62 0.2258 0.1810 0.3387 0.038 4axi-a1-m3-cB_4axi-a1-m3-cA
43 4axi-a1-m2-cA 116 62 0.2258 0.1810 0.3387 0.038 4axi-a1-m3-cB_4axi-a1-m2-cA
44 3ax6-a2-m1-cD 349 73 0.2258 0.0602 0.2877 2.8 3ax6-a2-m1-cC_3ax6-a2-m1-cD
45 7xto-a1-m1-cE 247 28 0.1290 0.0486 0.4286 3.9 7xto-a1-m1-cE_7xto-a1-m1-cB
46 7xto-a1-m1-cB 252 28 0.1290 0.0476 0.4286 3.9 7xto-a1-m1-cE_7xto-a1-m1-cB
47 5gvh-a1-m2-cA 311 34 0.1398 0.0418 0.3824 6.1 5gvh-a1-m1-cA_5gvh-a1-m2-cA
48 5gvh-a1-m1-cA 311 34 0.1398 0.0418 0.3824 6.1 5gvh-a1-m1-cA_5gvh-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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