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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=70)
HHHHENLFYQGPLTPADVHNVAFSKPPIGKRGYNEDEVDAFLDLVENELTRLIEENSDLR
QRINELDQEL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6lfa-a1-m2-cA 70 70 1.0000 1.0000 1.0000 3.91e-47 6lfa-a1-m1-cA_6lfa-a1-m2-cA, 6lfa-a1-m2-cB_6lfa-a1-m2-cA
2 6lfa-a1-m1-cA 70 70 1.0000 1.0000 1.0000 3.91e-47 6lfa-a1-m1-cA_6lfa-a1-m2-cA
3 6lfa-a1-m2-cB 62 68 0.8857 1.0000 0.9118 1.26e-37 6lfa-a1-m1-cB_6lfa-a1-m2-cB, 6lfa-a1-m2-cB_6lfa-a1-m2-cA
4 6lfa-a1-m1-cB 62 68 0.8857 1.0000 0.9118 1.26e-37 6lfa-a1-m1-cB_6lfa-a1-m2-cB
5 2wuj-a1-m1-cB 50 53 0.3000 0.4200 0.3962 7.71e-07 2wuj-a1-m1-cA_2wuj-a1-m1-cB
6 2wuj-a1-m1-cA 50 53 0.3000 0.4200 0.3962 7.71e-07 2wuj-a1-m1-cA_2wuj-a1-m1-cB
7 6gp7-a1-m1-cA 58 41 0.2286 0.2759 0.3902 0.034 6gp7-a1-m1-cA_6gp7-a1-m1-cB
8 6gp7-a1-m1-cB 59 41 0.2286 0.2712 0.3902 0.041 6gp7-a1-m1-cA_6gp7-a1-m1-cB
9 6gqa-a1-m1-cB 60 40 0.2571 0.3000 0.4500 0.055 6gqa-a1-m1-cC_6gqa-a1-m1-cB
10 4ug1-a1-m1-cB 73 42 0.2286 0.2192 0.3810 0.17 4ug1-a1-m1-cA_4ug1-a1-m1-cB
11 4ug1-a1-m1-cA 70 42 0.2286 0.2286 0.3810 0.20 4ug1-a1-m1-cA_4ug1-a1-m1-cB
12 6gqa-a1-m1-cD 58 39 0.2429 0.2931 0.4359 0.23 6gqa-a1-m1-cC_6gqa-a1-m1-cD
13 6gqa-a1-m1-cC 58 39 0.2429 0.2931 0.4359 0.23 6gqa-a1-m1-cC_6gqa-a1-m1-cB, 6gqa-a1-m1-cC_6gqa-a1-m1-cD
14 7o39-a1-m1-cB 51 53 0.2571 0.3529 0.3396 0.29 7o39-a1-m1-cA_7o39-a1-m1-cB
15 7o39-a1-m1-cA 51 53 0.2571 0.3529 0.3396 0.29 7o39-a1-m1-cA_7o39-a1-m1-cB
16 7wlt-a1-m1-cE 1353 67 0.2857 0.0148 0.2985 0.42 7wlt-a1-m1-cC_7wlt-a1-m1-cE
17 7wlt-a1-m1-cC 1353 67 0.2857 0.0148 0.2985 0.42 7wlt-a1-m1-cC_7wlt-a1-m1-cE
18 3q09-a4-m1-cT 241 51 0.2571 0.0747 0.3529 0.61 3q09-a4-m1-cQ_3q09-a4-m1-cT
19 3q09-a4-m1-cQ 241 51 0.2571 0.0747 0.3529 0.61 3q09-a4-m1-cQ_3q09-a4-m1-cT
20 3gyd-a1-m1-cB 174 11 0.1286 0.0517 0.8182 0.78 3gyd-a1-m1-cA_3gyd-a1-m1-cB
21 2ig6-a1-m1-cA 139 11 0.1286 0.0647 0.8182 0.88 2ig6-a1-m1-cB_2ig6-a1-m1-cA
22 8d8p-a1-m1-cB 420 48 0.2143 0.0357 0.3125 1.3 8d8p-a1-m1-cA_8d8p-a1-m1-cB
23 8d8p-a1-m1-cA 420 48 0.2143 0.0357 0.3125 1.3 8d8p-a1-m1-cA_8d8p-a1-m1-cB
24 7pax-a1-m2-cA 327 28 0.1429 0.0306 0.3571 1.3 7pax-a1-m1-cA_7pax-a1-m2-cA
25 7pax-a1-m1-cA 327 28 0.1429 0.0306 0.3571 1.3 7pax-a1-m1-cA_7pax-a1-m2-cA
26 2rd9-a3-m1-cC 183 11 0.1286 0.0492 0.8182 1.3 2rd9-a3-m1-cC_2rd9-a3-m1-cD
27 5k1s-a2-m1-cC 358 11 0.1143 0.0223 0.7273 1.9 5k1s-a2-m1-cD_5k1s-a2-m1-cC
28 5c9n-a1-m1-cA 64 44 0.2000 0.2188 0.3182 3.0 5c9n-a1-m1-cB_5c9n-a1-m1-cA
29 5c9n-a1-m1-cB 61 44 0.2000 0.2295 0.3182 3.1 5c9n-a1-m1-cB_5c9n-a1-m1-cA
30 3jb9-a1-m1-cU 430 58 0.2286 0.0372 0.2759 5.8 3jb9-a1-m1-cS_3jb9-a1-m1-cU, 3jb9-a1-m1-cV_3jb9-a1-m1-cU
31 3gyd-a1-m1-cA 172 10 0.1143 0.0465 0.8000 5.9 3gyd-a1-m1-cA_3gyd-a1-m1-cB
32 3bm7-a1-m2-cA 102 10 0.1143 0.0784 0.8000 6.2 3bm7-a1-m1-cA_3bm7-a1-m2-cA
33 3bm7-a1-m1-cA 102 10 0.1143 0.0784 0.8000 6.2 3bm7-a1-m1-cA_3bm7-a1-m2-cA
34 2ig6-a1-m1-cB 135 10 0.1143 0.0593 0.8000 6.4 2ig6-a1-m1-cB_2ig6-a1-m1-cA
35 1bg1-a1-m2-cA 558 27 0.1571 0.0197 0.4074 9.7 1bg1-a1-m1-cA_1bg1-a1-m2-cA
36 1bg1-a1-m1-cA 558 27 0.1571 0.0197 0.4074 9.7 1bg1-a1-m1-cA_1bg1-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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