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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=84)
HHHHHHSWREQGKPPMLFKRFAFGSYAQTRAFLDALAALSEETGQHPQNINFGTTYVNIT
LDAATLGEAERAFAARVDALAGSS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4low-a1-m1-cA 84 84 1.0000 1.0000 1.0000 9.07e-59 4low-a1-m1-cB_4low-a1-m1-cA
2 4low-a1-m1-cB 79 81 0.9405 1.0000 0.9753 4.05e-53 4low-a1-m1-cB_4low-a1-m1-cA
3 1usm-a1-m2-cA 77 76 0.2738 0.2987 0.3026 0.025 1usm-a1-m1-cA_1usm-a1-m2-cA
4 1usm-a1-m1-cA 77 76 0.2738 0.2987 0.3026 0.025 1usm-a1-m1-cA_1usm-a1-m2-cA
5 4wil-a1-m2-cA 100 79 0.2500 0.2100 0.2658 0.034 4wil-a1-m2-cB_4wil-a1-m2-cA
6 4wil-a1-m1-cA 100 79 0.2500 0.2100 0.2658 0.034 4wil-a1-m2-cB_4wil-a1-m1-cA
7 4wil-a1-m2-cB 98 60 0.2024 0.1735 0.2833 0.036 4wil-a1-m1-cB_4wil-a1-m2-cB, 4wil-a1-m2-cB_4wil-a1-m1-cA, 4wil-a1-m2-cB_4wil-a1-m2-cA
8 4wil-a1-m1-cB 98 60 0.2024 0.1735 0.2833 0.036 4wil-a1-m1-cB_4wil-a1-m2-cB
9 2v6u-a1-m2-cB 99 63 0.2143 0.1818 0.2857 0.28 2v6u-a1-m2-cB_2v6u-a1-m1-cA, 2v6u-a1-m2-cB_2v6u-a1-m2-cA
10 2v6t-a1-m2-cB 100 63 0.2143 0.1800 0.2857 0.29 2v6t-a1-m1-cB_2v6t-a1-m2-cB
11 2v6t-a1-m1-cB 100 63 0.2143 0.1800 0.2857 0.29 2v6t-a1-m1-cB_2v6t-a1-m2-cB
12 2v6u-a1-m2-cA 103 63 0.2143 0.1748 0.2857 0.30 2v6u-a1-m2-cB_2v6u-a1-m2-cA
13 2v6u-a1-m1-cA 103 63 0.2143 0.1748 0.2857 0.30 2v6u-a1-m2-cB_2v6u-a1-m1-cA
14 2ebb-a1-m2-cA 96 45 0.1548 0.1354 0.2889 0.92 2ebb-a1-m1-cA_2ebb-a1-m2-cA
15 2ebb-a1-m1-cA 96 45 0.1548 0.1354 0.2889 0.92 2ebb-a1-m1-cA_2ebb-a1-m2-cA
16 4e8d-a1-m1-cA 590 22 0.1190 0.0169 0.4545 5.4 4e8d-a1-m1-cA_4e8d-a1-m1-cB
17 4e8d-a1-m1-cB 594 22 0.1190 0.0168 0.4545 5.4 4e8d-a1-m1-cA_4e8d-a1-m1-cB
18 2ig8-a1-m1-cC 142 52 0.1905 0.1127 0.3077 5.7 2ig8-a1-m1-cC_2ig8-a1-m1-cB
19 2ig8-a1-m1-cB 143 52 0.1905 0.1119 0.3077 6.1 2ig8-a1-m1-cC_2ig8-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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