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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=88)
HHHHMNKQELIDAVAAQTGASKAQTGETLDTLLEVIKKAVSKGDAVQLIGFGSFGSGKRA
ARTGTIKIPAAKTVKFTAGKAFKDAVNK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6n2l-a1-m2-cA 88 88 1.0000 1.0000 1.0000 1.20e-58 6n2l-a1-m1-cA_6n2l-a1-m2-cA
2 6n2l-a1-m1-cA 88 88 1.0000 1.0000 1.0000 1.20e-58 6n2l-a1-m1-cA_6n2l-a1-m2-cA
3 4qjn-a2-m1-cD 90 89 0.4886 0.4778 0.4831 1.21e-20 4qjn-a2-m1-cB_4qjn-a2-m1-cD
4 4qjn-a2-m1-cB 90 89 0.4886 0.4778 0.4831 1.21e-20 4qjn-a2-m1-cB_4qjn-a2-m1-cD
5 1hue-a1-m1-cB 90 89 0.4886 0.4778 0.4831 6.74e-20 1hue-a1-m1-cA_1hue-a1-m1-cB
6 1hue-a1-m1-cA 90 89 0.4886 0.4778 0.4831 6.74e-20 1hue-a1-m1-cA_1hue-a1-m1-cB
7 1p71-a1-m1-cB 93 89 0.4659 0.4409 0.4607 1.66e-18 1p71-a1-m1-cB_1p71-a1-m1-cA
8 1p71-a1-m1-cA 94 89 0.4659 0.4362 0.4607 1.72e-18 1p71-a1-m1-cB_1p71-a1-m1-cA
9 6o8q-a1-m1-cH 91 89 0.4659 0.4505 0.4607 5.64e-18 6o8q-a1-m1-cG_6o8q-a1-m1-cH
10 6o8q-a1-m1-cG 91 89 0.4659 0.4505 0.4607 5.64e-18 6o8q-a1-m1-cG_6o8q-a1-m1-cH
11 5fbm-a1-m1-cB 83 81 0.4318 0.4578 0.4691 9.04e-17 5fbm-a1-m1-cA_5fbm-a1-m1-cB
12 5lvt-a2-m1-cD 91 88 0.4659 0.4505 0.4659 1.85e-16 5lvt-a2-m1-cB_5lvt-a2-m1-cD
13 5lvt-a2-m1-cB 91 88 0.4659 0.4505 0.4659 1.85e-16 5lvt-a2-m1-cB_5lvt-a2-m1-cD
14 1huu-a4-m3-cB 74 82 0.4545 0.5405 0.4878 3.50e-16 1huu-a4-m1-cB_1huu-a4-m3-cB
15 1huu-a4-m1-cB 74 82 0.4545 0.5405 0.4878 3.50e-16 1huu-a4-m1-cB_1huu-a4-m3-cB
16 5fbm-a1-m1-cA 83 81 0.4318 0.4578 0.4691 2.24e-15 5fbm-a1-m1-cA_5fbm-a1-m1-cB
17 4p3v-a1-m2-cA 72 83 0.4091 0.5000 0.4337 5.29e-15 4p3v-a1-m1-cA_4p3v-a1-m2-cA
18 4p3v-a1-m1-cA 72 83 0.4091 0.5000 0.4337 5.29e-15 4p3v-a1-m1-cA_4p3v-a1-m2-cA
19 3rhi-a2-m1-cD 82 82 0.4091 0.4390 0.4390 6.27e-14 3rhi-a2-m1-cD_3rhi-a2-m1-cC
20 3rhi-a2-m1-cC 90 89 0.4205 0.4111 0.4157 8.99e-14 3rhi-a2-m1-cD_3rhi-a2-m1-cC
21 5eka-a1-m2-cA 85 84 0.4091 0.4235 0.4286 1.69e-13 5eka-a1-m1-cA_5eka-a1-m2-cA
22 5eka-a1-m1-cA 85 84 0.4091 0.4235 0.4286 1.69e-13 5eka-a1-m1-cA_5eka-a1-m2-cA
23 5l8z-a1-m2-cA 95 93 0.4318 0.4000 0.4086 4.85e-12 5l8z-a1-m1-cA_5l8z-a1-m2-cA
24 5l8z-a1-m1-cA 95 93 0.4318 0.4000 0.4086 4.85e-12 5l8z-a1-m1-cA_5l8z-a1-m2-cA
25 1b8z-a1-m1-cB 67 82 0.4091 0.5373 0.4390 1.14e-10 1b8z-a1-m1-cA_1b8z-a1-m1-cB
26 1b8z-a1-m1-cA 67 82 0.4091 0.5373 0.4390 1.14e-10 1b8z-a1-m1-cA_1b8z-a1-m1-cB
27 4dky-a1-m2-cA 97 90 0.3636 0.3299 0.3556 6.84e-09 4dky-a1-m1-cA_4dky-a1-m2-cA
28 4dky-a1-m1-cA 97 90 0.3636 0.3299 0.3556 6.84e-09 4dky-a1-m1-cA_4dky-a1-m2-cA
29 1exe-a1-m1-cB 99 60 0.2841 0.2525 0.4167 2.57e-08 1exe-a1-m1-cA_1exe-a1-m1-cB
30 1exe-a1-m1-cA 99 60 0.2841 0.2525 0.4167 2.57e-08 1exe-a1-m1-cA_1exe-a1-m1-cB
31 1wtu-a1-m1-cB 99 60 0.2614 0.2323 0.3833 2.51e-06 1wtu-a1-m1-cA_1wtu-a1-m1-cB
32 1wtu-a1-m1-cA 99 60 0.2614 0.2323 0.3833 2.51e-06 1wtu-a1-m1-cA_1wtu-a1-m1-cB
33 2ndp-a1-m1-cB 99 86 0.2727 0.2424 0.2791 0.016 2ndp-a1-m1-cA_2ndp-a1-m1-cB
34 2ndp-a1-m1-cA 99 86 0.2727 0.2424 0.2791 0.016 2ndp-a1-m1-cA_2ndp-a1-m1-cB
35 6lmj-a1-m1-cA 99 96 0.3182 0.2828 0.2917 1.2 6lmj-a1-m1-cB_6lmj-a1-m1-cA
36 6lmj-a1-m1-cB 98 96 0.3182 0.2857 0.2917 1.2 6lmj-a1-m1-cB_6lmj-a1-m1-cA
37 5yek-a1-m1-cB 167 70 0.2386 0.1257 0.3000 2.2 5yek-a1-m1-cA_5yek-a1-m1-cB
38 2x0s-a1-m2-cA 899 50 0.1591 0.0156 0.2800 7.2 2x0s-a1-m1-cA_2x0s-a1-m2-cA
39 2x0s-a1-m1-cA 899 50 0.1591 0.0156 0.2800 7.2 2x0s-a1-m1-cA_2x0s-a1-m2-cA
40 7cyi-a2-m1-cC 375 44 0.1818 0.0427 0.3636 9.9 7cyi-a2-m1-cB_7cyi-a2-m1-cC
41 7cyi-a2-m1-cB 375 44 0.1818 0.0427 0.3636 9.9 7cyi-a2-m1-cB_7cyi-a2-m1-cC

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Reference:
Jacob Schwartz et al.

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