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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=41)
HHHHMVCMVCKKKIGNSAFARYPNGVVVHYFCSKEVNPADT

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6ze9-a2-m4-cB 41 41 1.0000 1.0000 1.0000 1.25e-25 6ze9-a2-m1-cB_6ze9-a2-m4-cB, 6ze9-a2-m2-cB_6ze9-a2-m4-cB
2 6ze9-a2-m2-cB 41 41 1.0000 1.0000 1.0000 1.25e-25 6ze9-a2-m2-cB_6ze9-a2-m4-cB
3 6ze9-a2-m1-cB 41 41 1.0000 1.0000 1.0000 1.25e-25 6ze9-a2-m1-cB_6ze9-a2-m4-cB
4 6kfs-a1-m2-cA 248 35 0.3659 0.0605 0.4286 1.3 6kfs-a1-m1-cA_6kfs-a1-m2-cA
5 6kfs-a1-m1-cA 248 35 0.3659 0.0605 0.4286 1.3 6kfs-a1-m1-cA_6kfs-a1-m2-cA
6 6mtw-a1-m1-cB 376 22 0.2439 0.0266 0.4545 1.7 6mtw-a1-m1-cA_6mtw-a1-m1-cB
7 6mtw-a1-m1-cA 376 22 0.2439 0.0266 0.4545 1.7 6mtw-a1-m1-cA_6mtw-a1-m1-cB
8 5ua0-a1-m2-cA 271 27 0.2439 0.0369 0.3704 2.4 5ua0-a1-m1-cA_5ua0-a1-m2-cA
9 5ua0-a1-m1-cA 271 27 0.2439 0.0369 0.3704 2.4 5ua0-a1-m1-cA_5ua0-a1-m2-cA
10 2vr2-a1-m4-cA 478 18 0.1951 0.0167 0.4444 3.1 2vr2-a1-m2-cA_2vr2-a1-m4-cA, 2vr2-a1-m3-cA_2vr2-a1-m4-cA
11 2vr2-a1-m3-cA 478 18 0.1951 0.0167 0.4444 3.1 2vr2-a1-m3-cA_2vr2-a1-m4-cA
12 2vr2-a1-m2-cA 478 18 0.1951 0.0167 0.4444 3.1 2vr2-a1-m2-cA_2vr2-a1-m4-cA
13 2o03-a1-m2-cA 129 14 0.1951 0.0620 0.5714 3.3 2o03-a1-m1-cA_2o03-a1-m2-cA
14 2o03-a1-m1-cA 129 14 0.1951 0.0620 0.5714 3.3 2o03-a1-m1-cA_2o03-a1-m2-cA
15 5jr6-a1-m1-cA 628 18 0.1951 0.0127 0.4444 4.8 5jr6-a1-m1-cB_5jr6-a1-m1-cA
16 4y5t-a1-m1-cB 285 27 0.2683 0.0386 0.4074 6.9 4y5t-a1-m1-cB_4y5t-a1-m1-cA
17 4y5t-a1-m1-cA 289 27 0.2683 0.0381 0.4074 6.9 4y5t-a1-m1-cB_4y5t-a1-m1-cA
18 4ktr-a4-m1-cH 761 29 0.2439 0.0131 0.3448 7.4 4ktr-a4-m1-cH_4ktr-a4-m1-cG
19 4ktr-a4-m1-cG 762 29 0.2439 0.0131 0.3448 7.4 4ktr-a4-m1-cH_4ktr-a4-m1-cG

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Reference:
Jacob Schwartz et al.

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