Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=63)
HHSHMSGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMSECYFYSKFGECSNKECPFLHI
DPE

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2rhk-a3-m1-cC 63 63 1.0000 1.0000 1.0000 6.21e-43 2rhk-a3-m1-cD_2rhk-a3-m1-cC
2 2rhk-a2-m1-cC 63 63 1.0000 1.0000 1.0000 6.21e-43 2rhk-a2-m2-cD_2rhk-a2-m1-cC
3 2rhk-a3-m1-cD 60 60 0.9524 1.0000 1.0000 1.13e-40 2rhk-a3-m1-cD_2rhk-a3-m1-cC
4 2rhk-a2-m2-cD 60 60 0.9524 1.0000 1.0000 1.13e-40 2rhk-a2-m2-cD_2rhk-a2-m1-cC
5 1d2e-a1-m1-cD 397 26 0.2222 0.0353 0.5385 0.019 1d2e-a1-m1-cA_1d2e-a1-m1-cD
6 1d2e-a1-m1-cC 397 26 0.2222 0.0353 0.5385 0.019 1d2e-a1-m1-cA_1d2e-a1-m1-cC
7 1d2e-a1-m1-cA 397 26 0.2222 0.0353 0.5385 0.019 1d2e-a1-m1-cA_1d2e-a1-m1-cC, 1d2e-a1-m1-cA_1d2e-a1-m1-cD
8 4cs7-a1-m1-cC 172 21 0.1587 0.0581 0.4762 0.30 4cs7-a1-m1-cE_4cs7-a1-m1-cC
9 4csa-a1-m1-cC 164 21 0.1587 0.0610 0.4762 0.30 4csa-a1-m1-cB_4csa-a1-m1-cC
10 4cs7-a1-m1-cE 168 21 0.1587 0.0595 0.4762 0.32 4cs7-a1-m1-cB_4cs7-a1-m1-cE, 4cs7-a1-m1-cE_4cs7-a1-m1-cC
11 4cs7-a1-m1-cB 166 21 0.1587 0.0602 0.4762 0.32 4cs7-a1-m1-cB_4cs7-a1-m1-cE
12 4cs8-a1-m1-cB 164 21 0.1587 0.0610 0.4762 0.33 4cs8-a1-m1-cA_4cs8-a1-m1-cB
13 4cs8-a1-m1-cC 162 21 0.1587 0.0617 0.4762 0.34 4cs8-a1-m1-cA_4cs8-a1-m1-cC
14 4cs8-a1-m1-cA 159 21 0.1587 0.0629 0.4762 0.34 4cs8-a1-m1-cA_4cs8-a1-m1-cB, 4cs8-a1-m1-cA_4cs8-a1-m1-cC
15 4csa-a1-m1-cB 159 21 0.1587 0.0629 0.4762 0.35 4csa-a1-m1-cB_4csa-a1-m1-cC
16 4lj0-a1-m1-cB 64 46 0.2222 0.2188 0.3043 1.2 4lj0-a1-m1-cB_4lj0-a1-m1-cA
17 7yxm-a1-m1-cD 392 23 0.1746 0.0281 0.4783 1.2 7yxm-a1-m1-cB_7yxm-a1-m1-cD
18 7yxm-a1-m1-cB 392 23 0.1746 0.0281 0.4783 1.2 7yxm-a1-m1-cB_7yxm-a1-m1-cD
19 4lj0-a1-m1-cA 65 46 0.2222 0.2154 0.3043 1.2 4lj0-a1-m1-cB_4lj0-a1-m1-cA
20 5vn6-a1-m1-cB 268 30 0.1746 0.0410 0.3667 2.2 5vn6-a1-m1-cB_5vn6-a1-m1-cA
21 6jx7-a1-m1-cC 1245 38 0.1746 0.0088 0.2895 2.4 6jx7-a1-m1-cB_6jx7-a1-m1-cC
22 6jx7-a1-m1-cB 1245 38 0.1746 0.0088 0.2895 2.4 6jx7-a1-m1-cB_6jx7-a1-m1-cC
23 1lbq-a1-m1-cB 354 28 0.1587 0.0282 0.3571 5.3 1lbq-a1-m1-cB_1lbq-a1-m1-cA
24 1lbq-a1-m1-cA 356 28 0.1587 0.0281 0.3571 5.3 1lbq-a1-m1-cB_1lbq-a1-m1-cA
25 7bbn-a1-m1-cA 361 35 0.2063 0.0360 0.3714 5.5 7bbn-a1-m1-cA_7bbn-a1-m1-cB
26 7bbn-a1-m1-cB 366 35 0.2063 0.0355 0.3714 5.5 7bbn-a1-m1-cA_7bbn-a1-m1-cB
27 4c3b-a4-m1-cE 174 21 0.1587 0.0575 0.4762 8.2 4c3b-a4-m1-cE_4c3b-a4-m1-cF
28 4c3b-a4-m1-cF 178 21 0.1587 0.0562 0.4762 8.2 4c3b-a4-m1-cE_4c3b-a4-m1-cF
29 7lg9-a1-m1-cA 272 17 0.1270 0.0294 0.4706 9.1 7lg9-a1-m1-cB_7lg9-a1-m1-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600