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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=65)
HITYKKLLDELKKEIGPIAKIFLNKAESLGYDDVDDSNYKEILSVLKNKELREYVEIVEE
RLEKE

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5a1q-a1-m1-cB 65 65 1.0000 1.0000 1.0000 1.31e-39 5a1q-a1-m1-cB_5a1q-a1-m1-cA
2 5a1q-a1-m1-cA 66 65 1.0000 0.9848 1.0000 1.47e-39 5a1q-a1-m1-cB_5a1q-a1-m1-cA
3 3wqo-a1-m1-cB 267 41 0.2769 0.0674 0.4390 0.54 3wqo-a1-m1-cB_3wqo-a1-m1-cA
4 3wqo-a1-m1-cA 271 41 0.2769 0.0664 0.4390 0.57 3wqo-a1-m1-cB_3wqo-a1-m1-cA
5 4ha6-a2-m2-cA 506 35 0.1692 0.0217 0.3143 1.2 4ha6-a2-m1-cA_4ha6-a2-m2-cA
6 4ha6-a2-m1-cA 506 35 0.1692 0.0217 0.3143 1.2 4ha6-a2-m1-cA_4ha6-a2-m2-cA
7 4z0y-a3-m1-cD 346 25 0.1692 0.0318 0.4400 5.4 4z0y-a3-m1-cB_4z0y-a3-m1-cD
8 4z0y-a3-m1-cB 346 25 0.1692 0.0318 0.4400 5.4 4z0y-a3-m1-cB_4z0y-a3-m1-cD
9 4h0u-a2-m1-cC 254 38 0.1846 0.0472 0.3158 7.4 4h0u-a2-m1-cC_4h0u-a2-m1-cD
10 4h0u-a2-m1-cD 254 38 0.1846 0.0472 0.3158 8.0 4h0u-a2-m1-cC_4h0u-a2-m1-cD
11 2hzs-a6-m1-cD 214 36 0.2154 0.0654 0.3889 8.6 2hzs-a6-m1-cD_2hzs-a6-m1-cB
12 2hzs-a5-m1-cD 214 36 0.2154 0.0654 0.3889 8.6 2hzs-a5-m1-cD_2hzs-a5-m2-cF

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Reference:
Jacob Schwartz et al.

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