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TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=87)
HKIPAEADFLIAYSTAPGYYSYRNTSNGSWFIQSLCEVLNKYGSELEIMEILTRVNHKVS
LRESSFNGKKQMPCFASMLTKKLYFSP

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6pdq-a1-m1-cB 87 87 1.0000 1.0000 1.0000 2.61e-62 6pdq-a1-m1-cE_6pdq-a1-m1-cB
2 6pdq-a1-m1-cE 85 87 0.9655 0.9882 0.9655 1.27e-57 6pdq-a1-m1-cE_6pdq-a1-m1-cB
3 7jl7-a1-m1-cD 94 93 0.6782 0.6277 0.6344 2.60e-41 7jl7-a1-m1-cD_7jl7-a1-m1-cC
4 7jl7-a1-m1-cC 96 92 0.6782 0.6146 0.6413 3.04e-41 7jl7-a1-m1-cD_7jl7-a1-m1-cC
5 4fxo-a1-m1-cD 220 85 0.6552 0.2591 0.6706 2.73e-35 4fxo-a1-m1-cD_4fxo-a1-m1-cB
6 4fxo-a1-m1-cB 227 87 0.6667 0.2555 0.6667 8.34e-35 4fxo-a1-m1-cD_4fxo-a1-m1-cB
7 3k7e-a1-m1-cC 212 85 0.6552 0.2689 0.6706 8.53e-35 3k7e-a1-m1-cB_3k7e-a1-m1-cC
8 4jqy-a1-m1-cB 205 85 0.6322 0.2683 0.6471 4.00e-34 4jqy-a1-m1-cA_4jqy-a1-m1-cB
9 3sip-a2-m1-cD 100 93 0.5287 0.4600 0.4946 2.31e-27 3sip-a2-m1-cD_3sip-a2-m1-cB
10 3sip-a2-m1-cB 103 93 0.5287 0.4466 0.4946 2.69e-27 3sip-a2-m1-cD_3sip-a2-m1-cB
11 1m72-a2-m2-cC 252 93 0.5287 0.1825 0.4946 9.72e-26 1m72-a2-m1-cC_1m72-a2-m2-cC
12 1m72-a2-m1-cC 252 93 0.5287 0.1825 0.4946 9.72e-26 1m72-a2-m1-cC_1m72-a2-m2-cC
13 3sir-a1-m1-cA 214 86 0.5057 0.2056 0.5116 1.27e-24 3sir-a1-m1-cB_3sir-a1-m1-cA
14 4jqy-a1-m1-cA 194 85 0.5517 0.2474 0.5647 2.77e-24 4jqy-a1-m1-cA_4jqy-a1-m1-cB
15 3k7e-a1-m1-cB 200 83 0.5517 0.2400 0.5783 2.47e-23 3k7e-a1-m1-cB_3k7e-a1-m1-cC
16 4m9r-a1-m1-cA 256 89 0.4713 0.1602 0.4607 2.46e-22 4m9r-a1-m1-cB_4m9r-a1-m1-cA
17 3v6m-a3-m1-cG 204 85 0.5172 0.2206 0.5294 3.69e-22 3v6m-a3-m1-cF_3v6m-a3-m1-cG
18 3v6m-a3-m1-cF 203 85 0.5287 0.2266 0.5412 3.70e-22 3v6m-a3-m1-cF_3v6m-a3-m1-cG
19 4fea-a1-m1-cA 170 83 0.4713 0.2412 0.4940 9.74e-22 4fea-a1-m1-cA_4fea-a1-m1-cB
20 4fea-a1-m1-cB 196 83 0.4828 0.2143 0.5060 1.66e-20 4fea-a1-m1-cA_4fea-a1-m1-cB
21 3sir-a1-m1-cB 172 86 0.4483 0.2267 0.4535 5.24e-17 3sir-a1-m1-cB_3sir-a1-m1-cA
22 4m9r-a1-m1-cB 223 86 0.3908 0.1525 0.3953 1.30e-13 4m9r-a1-m1-cB_4m9r-a1-m1-cA
23 1pyo-a1-m1-cB 98 91 0.2989 0.2653 0.2857 1.32e-12 1pyo-a1-m1-cB_1pyo-a1-m1-cD
24 1pyo-a1-m1-cD 99 91 0.2989 0.2626 0.2857 1.40e-12 1pyo-a1-m1-cB_1pyo-a1-m1-cD
25 1jxq-a2-m1-cD 226 83 0.3103 0.1195 0.3253 2.34e-12 1jxq-a2-m1-cD_1jxq-a2-m1-cC
26 1jxq-a2-m1-cC 242 83 0.3103 0.1116 0.3253 2.85e-12 1jxq-a2-m1-cD_1jxq-a2-m1-cC
27 6px9-a3-m1-cE 210 84 0.3563 0.1476 0.3690 1.78e-06 6px9-a3-m1-cF_6px9-a3-m1-cE
28 6px9-a3-m1-cF 209 84 0.3563 0.1483 0.3690 2.39e-06 6px9-a3-m1-cF_6px9-a3-m1-cE
29 3e4c-a1-m1-cB 257 83 0.2989 0.1012 0.3133 4.76e-05 3e4c-a1-m1-cB_3e4c-a1-m1-cA
30 3e4c-a1-m1-cA 271 83 0.2989 0.0959 0.3133 7.00e-05 3e4c-a1-m1-cB_3e4c-a1-m1-cA
31 6kmz-a2-m1-cd 88 88 0.2759 0.2727 0.2727 2.34e-04 6kmz-a2-m1-cc_6kmz-a2-m1-cd
32 6kmz-a2-m1-cc 88 88 0.2759 0.2727 0.2727 2.34e-04 6kmz-a2-m1-cc_6kmz-a2-m1-cd
33 4qvs-a1-m2-cA 213 35 0.1149 0.0469 0.2857 8.0 4qvs-a1-m1-cA_4qvs-a1-m2-cA
34 4qvs-a1-m1-cA 213 35 0.1149 0.0469 0.2857 8.0 4qvs-a1-m1-cA_4qvs-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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