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HomodimerDB
>protein (length=24)
HLCGSHLVEALYLVCGERGFFYTP

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7ins-a9-m2-cF 30 24 1.0000 0.8000 1.0000 2.12e-12 7ins-a9-m1-cD_7ins-a9-m2-cF
2 7ins-a9-m1-cD 30 24 1.0000 0.8000 1.0000 2.12e-12 7ins-a9-m1-cD_7ins-a9-m2-cF
3 8gsg-a1-m3-cD 30 24 1.0000 0.8000 1.0000 2.17e-12 8gsg-a1-m2-cB_8gsg-a1-m3-cD
4 8gsg-a1-m2-cB 30 24 1.0000 0.8000 1.0000 2.17e-12 8gsg-a1-m2-cB_8gsg-a1-m3-cD
5 5aiy-a1-m1-cL 30 24 1.0000 0.8000 1.0000 2.17e-12 5aiy-a1-m1-cJ_5aiy-a1-m1-cL
6 5aiy-a1-m1-cJ 30 24 1.0000 0.8000 1.0000 2.17e-12 5aiy-a1-m1-cJ_5aiy-a1-m1-cL
7 4f51-a1-m3-cD 30 24 1.0000 0.8000 1.0000 2.17e-12 4f51-a1-m2-cB_4f51-a1-m3-cD
8 4f51-a1-m2-cD 30 24 1.0000 0.8000 1.0000 2.17e-12 4f51-a1-m2-cB_4f51-a1-m2-cD
9 4f51-a1-m2-cB 30 24 1.0000 0.8000 1.0000 2.17e-12 4f51-a1-m2-cB_4f51-a1-m2-cD, 4f51-a1-m2-cB_4f51-a1-m3-cD
10 4aiy-a1-m1-cL 30 24 1.0000 0.8000 1.0000 2.17e-12 4aiy-a1-m1-cF_4aiy-a1-m1-cL
11 4aiy-a1-m1-cF 30 24 1.0000 0.8000 1.0000 2.17e-12 4aiy-a1-m1-cF_4aiy-a1-m1-cL
12 3fq9-a5-m3-cD 30 24 1.0000 0.8000 1.0000 2.17e-12 3fq9-a5-m2-cB_3fq9-a5-m3-cD
13 3fq9-a5-m2-cB 30 24 1.0000 0.8000 1.0000 2.17e-12 3fq9-a5-m2-cB_3fq9-a5-m3-cD
14 2aiy-a1-m1-cL 30 24 1.0000 0.8000 1.0000 2.17e-12 2aiy-a1-m1-cH_2aiy-a1-m1-cL
15 2aiy-a1-m1-cH 30 24 1.0000 0.8000 1.0000 2.17e-12 2aiy-a1-m1-cH_2aiy-a1-m1-cL
16 1rwe-a3-m3-cD 30 24 1.0000 0.8000 1.0000 2.17e-12 1rwe-a3-m2-cD_1rwe-a3-m3-cD
17 1rwe-a3-m2-cD 30 24 1.0000 0.8000 1.0000 2.17e-12 1rwe-a3-m2-cD_1rwe-a3-m3-cD
18 1ben-a9-m3-cB 30 24 1.0000 0.8000 1.0000 2.17e-12 1ben-a9-m3-cD_1ben-a9-m3-cB
19 1ben-a9-m1-cB 30 24 1.0000 0.8000 1.0000 2.17e-12 1ben-a9-m3-cD_1ben-a9-m1-cB
20 1aiy-a1-m1-cL 30 24 1.0000 0.8000 1.0000 2.17e-12 1aiy-a1-m1-cJ_1aiy-a1-m1-cL
21 1aiy-a1-m1-cJ 30 24 1.0000 0.8000 1.0000 2.17e-12 1aiy-a1-m1-cJ_1aiy-a1-m1-cL
22 5mam-a4-m3-c5 28 24 1.0000 0.8571 1.0000 2.26e-12 5mam-a4-m3-c3_5mam-a4-m3-c5
23 1ben-a9-m3-cD 28 24 1.0000 0.8571 1.0000 2.97e-12 1ben-a9-m3-cD_1ben-a9-m1-cB, 1ben-a9-m3-cD_1ben-a9-m3-cB
24 5wdm-a1-m1-cB 46 24 1.0000 0.5217 1.0000 3.65e-12 5wdm-a1-m1-cC_5wdm-a1-m1-cB, 5wdm-a1-m1-cF_5wdm-a1-m1-cB
25 5wdm-a1-m1-cE 47 24 1.0000 0.5106 1.0000 3.72e-12 5wdm-a1-m1-cD_5wdm-a1-m1-cE, 5wdm-a1-m1-cF_5wdm-a1-m1-cE
26 5wdm-a1-m1-cD 47 24 1.0000 0.5106 1.0000 3.72e-12 5wdm-a1-m1-cC_5wdm-a1-m1-cD, 5wdm-a1-m1-cD_5wdm-a1-m1-cE
27 5mam-a4-m3-c3 24 24 1.0000 1.0000 1.0000 4.23e-12 5mam-a4-m3-c3_5mam-a4-m3-c5
28 4une-a3-m1-cB 30 24 0.9583 0.7667 0.9583 6.94e-12 4une-a3-m2-cD_4une-a3-m1-cB
29 4une-a3-m2-cD 29 24 0.9583 0.7931 0.9583 7.24e-12 4une-a3-m2-cD_4une-a3-m1-cB
30 1zei-a1-m1-cF 53 24 0.9583 0.4340 0.9583 2.38e-11 1zei-a1-m1-cE_1zei-a1-m1-cF
31 1zei-a1-m1-cE 53 24 0.9583 0.4340 0.9583 2.38e-11 1zei-a1-m1-cE_1zei-a1-m1-cF
32 7jp3-a1-m1-cE 49 24 0.9583 0.4694 0.9583 2.80e-11 7jp3-a1-m1-cB_7jp3-a1-m1-cE
33 7jp3-a1-m1-cB 49 24 0.9583 0.4694 0.9583 2.80e-11 7jp3-a1-m1-cB_7jp3-a1-m1-cE
34 1htv-a1-m1-cL 27 23 0.9583 0.8519 1.0000 3.81e-11 1htv-a1-m1-cF_1htv-a1-m1-cL
35 1htv-a1-m1-cF 27 23 0.9583 0.8519 1.0000 3.81e-11 1htv-a1-m1-cF_1htv-a1-m1-cL
36 1htv-a1-m1-cD 27 23 0.9583 0.8519 1.0000 3.81e-11 1htv-a1-m1-cB_1htv-a1-m1-cD
37 1htv-a1-m1-cB 27 23 0.9583 0.8519 1.0000 3.81e-11 1htv-a1-m1-cB_1htv-a1-m1-cD
38 5wdm-a1-m1-cA 45 23 0.9583 0.5111 1.0000 5.04e-11 5wdm-a1-m1-cC_5wdm-a1-m1-cA, 5wdm-a1-m1-cF_5wdm-a1-m1-cA
39 5wdm-a1-m1-cF 44 23 0.9583 0.5227 1.0000 5.76e-11 5wdm-a1-m1-cF_5wdm-a1-m1-cA, 5wdm-a1-m1-cF_5wdm-a1-m1-cB, 5wdm-a1-m1-cF_5wdm-a1-m1-cE
40 5wdm-a1-m1-cC 44 23 0.9583 0.5227 1.0000 5.76e-11 5wdm-a1-m1-cC_5wdm-a1-m1-cA, 5wdm-a1-m1-cC_5wdm-a1-m1-cB, 5wdm-a1-m1-cC_5wdm-a1-m1-cD
41 3zs2-a1-m1-cJ 28 24 0.8750 0.7500 0.8750 5.13e-10 3zs2-a1-m1-cB_3zs2-a1-m1-cJ, 3zs2-a1-m1-cL_3zs2-a1-m1-cJ
42 2wru-a1-m2-cB 24 21 0.8750 0.8750 1.0000 1.59e-09 2wru-a1-m1-cB_2wru-a1-m2-cB
43 2wru-a1-m1-cB 24 21 0.8750 0.8750 1.0000 1.59e-09 2wru-a1-m1-cB_2wru-a1-m2-cB
44 6s4j-a1-m3-cB 28 22 0.8750 0.7500 0.9545 3.04e-09 6s4j-a1-m2-cB_6s4j-a1-m3-cB
45 6s4j-a1-m2-cB 28 22 0.8750 0.7500 0.9545 3.04e-09 6s4j-a1-m2-cB_6s4j-a1-m3-cB
46 3zs2-a1-m1-cF 24 21 0.8333 0.8333 0.9524 4.66e-09 3zs2-a1-m1-cF_3zs2-a1-m1-cH
47 3zs2-a1-m1-cH 26 21 0.8333 0.7692 0.9524 4.68e-09 3zs2-a1-m1-cF_3zs2-a1-m1-cH
48 3zs2-a1-m1-cB 26 21 0.8333 0.7692 0.9524 4.68e-09 3zs2-a1-m1-cB_3zs2-a1-m1-cJ
49 3zs2-a1-m1-cL 25 21 0.8333 0.8000 0.9524 5.59e-09 3zs2-a1-m1-cL_3zs2-a1-m1-cJ
50 1dei-a3-m1-cD 23 19 0.7917 0.8261 1.0000 8.59e-08 1dei-a3-m1-cB_1dei-a3-m1-cD
51 1dei-a3-m1-cB 23 19 0.7917 0.8261 1.0000 8.59e-08 1dei-a3-m1-cB_1dei-a3-m1-cD
52 1wa3-a1-m1-cB 202 19 0.3750 0.0446 0.4737 1.3 1wa3-a1-m1-cA_1wa3-a1-m1-cB
53 1wa3-a1-m1-cA 202 19 0.3750 0.0446 0.4737 1.3 1wa3-a1-m1-cA_1wa3-a1-m1-cB
54 8ed3-a1-m1-cx 201 19 0.3750 0.0448 0.4737 1.3 8ed3-a1-m1-cV_8ed3-a1-m1-cx
55 8ed3-a1-m1-cV 201 19 0.3750 0.0448 0.4737 1.3 8ed3-a1-m1-cV_8ed3-a1-m1-cx

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Reference:
Jacob Schwartz et al.

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