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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=69)
HLLEQQKEQLESSLQDALAKLKNRDAKQTVQKHIDLLHTYNEIRDIALGMIGKVAEHEKC
TSVELFDRF

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3vir-a1-m1-cA 69 69 1.0000 1.0000 1.0000 8.92e-46 3vir-a1-m1-cC_3vir-a1-m1-cA
2 3vir-a1-m1-cD 63 62 0.8986 0.9841 1.0000 5.53e-40 3vir-a1-m1-cC_3vir-a1-m1-cD
3 3vir-a1-m1-cB 66 57 0.8261 0.8636 1.0000 8.55e-36 3vir-a1-m1-cC_3vir-a1-m1-cB
4 3vir-a1-m1-cC 53 53 0.7681 1.0000 1.0000 1.63e-32 3vir-a1-m1-cC_3vir-a1-m1-cA, 3vir-a1-m1-cC_3vir-a1-m1-cB, 3vir-a1-m1-cC_3vir-a1-m1-cD
5 4mz0-a1-m1-cA 896 30 0.2174 0.0167 0.5000 0.52 4mz0-a1-m1-cB_4mz0-a1-m1-cA
6 5h7w-a1-m1-cA 528 32 0.2029 0.0265 0.4375 6.4 5h7w-a1-m1-cA_5h7w-a1-m1-cB
7 5h7w-a1-m1-cB 529 32 0.2029 0.0265 0.4375 6.4 5h7w-a1-m1-cA_5h7w-a1-m1-cB
8 4yp9-a1-m1-cA 337 49 0.2319 0.0475 0.3265 7.8 4yp9-a1-m1-cA_4yp9-a1-m1-cB
9 6mab-a2-m4-cA 269 50 0.2319 0.0595 0.3200 8.9 6mab-a2-m2-cA_6mab-a2-m4-cA
10 6mab-a2-m2-cA 269 50 0.2319 0.0595 0.3200 8.9 6mab-a2-m2-cA_6mab-a2-m4-cA
11 7d65-a1-m1-cK 288 24 0.1449 0.0347 0.4167 9.0 7d65-a1-m1-cJ_7d65-a1-m1-cK
12 7d65-a1-m1-cJ 288 24 0.1449 0.0347 0.4167 9.0 7d65-a1-m1-cJ_7d65-a1-m1-cK
13 4yp9-a1-m1-cB 342 49 0.2319 0.0468 0.3265 9.5 4yp9-a1-m1-cA_4yp9-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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