HomodimerDB

Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB

>protein (length=92)
HLLKAGGSCFALISGTANQVKCYRFRVKKNHRHRYENCTTTWFTVADNGAERQGQAQILI
TFGSPSQRQDFLKHVPLPPGMNISGFTASLDF

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Dimers
1	6bus-a1-m1-c2	92	92	1.0000	1.0000	1.0000	3.42e-67	6bus-a1-m1-c1_6bus-a1-m1-c2
2	6bus-a1-m1-c1	92	92	1.0000	1.0000	1.0000	3.42e-67	6bus-a1-m1-c1_6bus-a1-m1-c2
3	1jjh-a2-m3-cB	78	86	0.8370	0.9872	0.8953	2.33e-52	1jjh-a2-m1-cB_1jjh-a2-m3-cB
4	1jjh-a2-m1-cB	78	86	0.8370	0.9872	0.8953	2.33e-52	1jjh-a2-m1-cB_1jjh-a2-m3-cB
5	1jjh-a1-m2-cA	77	86	0.8261	0.9870	0.8837	1.40e-51	1jjh-a1-m1-cA_1jjh-a1-m2-cA
6	1jjh-a1-m1-cA	77	86	0.8261	0.9870	0.8837	1.40e-51	1jjh-a1-m1-cA_1jjh-a1-m2-cA
7	1jjh-a3-m3-cC	73	85	0.7935	1.0000	0.8588	1.14e-48	1jjh-a3-m1-cC_1jjh-a3-m3-cC
8	1jjh-a3-m1-cC	73	85	0.7935	1.0000	0.8588	1.14e-48	1jjh-a3-m1-cC_1jjh-a3-m3-cC
9	1r8h-a7-m1-cD	87	67	0.2391	0.2529	0.3284	8.88e-10	1r8h-a7-m1-cC_1r8h-a7-m1-cD
10	1r8h-a4-m1-cE	87	67	0.2391	0.2529	0.3284	8.88e-10	1r8h-a4-m1-cB_1r8h-a4-m1-cE
11	1r8h-a4-m1-cB	87	67	0.2391	0.2529	0.3284	8.88e-10	1r8h-a4-m1-cB_1r8h-a4-m1-cE
12	1a7g-a1-m2-cE	82	72	0.2717	0.3049	0.3472	1.55e-09	1a7g-a1-m1-cE_1a7g-a1-m2-cE
13	1a7g-a1-m1-cE	82	72	0.2717	0.3049	0.3472	1.55e-09	1a7g-a1-m1-cE_1a7g-a1-m2-cE
14	1r8h-a7-m1-cC	83	67	0.2391	0.2651	0.3284	6.92e-09	1r8h-a7-m1-cC_1r8h-a7-m1-cD
15	1f9f-a2-m1-cD	82	71	0.2391	0.2683	0.3099	5.25e-07	1f9f-a2-m1-cC_1f9f-a2-m1-cD
16	2q79-a1-m2-cA	74	75	0.2717	0.3378	0.3333	8.66e-06	2q79-a1-m1-cA_2q79-a1-m2-cA
17	2q79-a1-m1-cA	74	75	0.2717	0.3378	0.3333	8.66e-06	2q79-a1-m1-cA_2q79-a1-m2-cA
18	1f9f-a2-m1-cC	76	71	0.2174	0.2632	0.2817	6.17e-05	1f9f-a2-m1-cC_1f9f-a2-m1-cD
19	4ylg-a1-m1-cA	165	66	0.2283	0.1273	0.3182	0.14	4ylg-a1-m1-cB_4ylg-a1-m1-cA
20	6fg9-a1-m1-cB	918	65	0.1957	0.0196	0.2769	3.3	6fg9-a1-m1-cA_6fg9-a1-m1-cB
21	6ffy-a1-m2-cA	918	65	0.1957	0.0196	0.2769	3.3	6ffy-a1-m1-cA_6ffy-a1-m2-cA
22	6ffy-a1-m1-cA	918	65	0.1957	0.0196	0.2769	3.3	6ffy-a1-m1-cA_6ffy-a1-m2-cA

[Back]

Reference:
Jacob Schwartz et al.