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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=99)
HLNPAEKEKLQIFLASELALKRKARGLKLNYPEAVAIITSFIMEGARDGKTVAMLMEEGK
HVLTRDDVMEGVPEMIDDIQAEATFPDGTKLVTVHNPIS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5ol4-a1-m3-cA 99 99 1.0000 1.0000 1.0000 1.50e-69 5ol4-a1-m2-cA_5ol4-a1-m3-cA
2 5ol4-a1-m2-cA 99 99 1.0000 1.0000 1.0000 1.50e-69 5ol4-a1-m2-cA_5ol4-a1-m3-cA
3 4fur-a2-m1-cF 100 99 0.5354 0.5300 0.5354 3.06e-36 4fur-a2-m1-cD_4fur-a2-m1-cF
4 4fur-a2-m1-cD 100 99 0.5354 0.5300 0.5354 3.06e-36 4fur-a2-m1-cD_4fur-a2-m1-cF
5 2fvh-a1-m1-cC 99 98 0.6465 0.6465 0.6531 1.07e-33 2fvh-a1-m1-cB_2fvh-a1-m1-cC
6 2fvh-a1-m1-cB 99 98 0.6465 0.6465 0.6531 1.07e-33 2fvh-a1-m1-cB_2fvh-a1-m1-cC
7 3qgk-a1-m2-cP 224 98 0.5758 0.2545 0.5816 8.34e-31 3qgk-a1-m2-cM_3qgk-a1-m2-cP
8 3qgk-a1-m2-cM 224 98 0.5758 0.2545 0.5816 8.34e-31 3qgk-a1-m2-cM_3qgk-a1-m2-cP
9 4gy7-a1-m3-cA 827 99 0.6162 0.0738 0.6162 1.33e-29 4gy7-a1-m2-cA_4gy7-a1-m3-cA
10 4gy7-a1-m2-cA 827 99 0.6162 0.0738 0.6162 1.33e-29 4gy7-a1-m2-cA_4gy7-a1-m3-cA
11 3la4-a1-m6-cA 833 99 0.6162 0.0732 0.6162 1.37e-29 3la4-a1-m1-cA_3la4-a1-m6-cA
12 3la4-a1-m1-cA 833 99 0.6162 0.0732 0.6162 1.37e-29 3la4-a1-m1-cA_3la4-a1-m6-cA
13 4g7e-a1-m3-cA 831 99 0.5657 0.0674 0.5657 9.86e-29 4g7e-a1-m3-cB_4g7e-a1-m3-cA
14 4g7e-a1-m3-cB 830 99 0.5657 0.0675 0.5657 1.02e-28 4g7e-a1-m2-cB_4g7e-a1-m3-cB, 4g7e-a1-m3-cB_4g7e-a1-m3-cA
15 4g7e-a1-m2-cB 830 99 0.5657 0.0675 0.5657 1.02e-28 4g7e-a1-m2-cB_4g7e-a1-m3-cB
16 7d7o-a1-m2-cA 372 49 0.1717 0.0457 0.3469 1.4 7d7o-a1-m2-cA_7d7o-a1-m2-cB
17 7d7o-a1-m1-cA 372 49 0.1717 0.0457 0.3469 1.4 7d7o-a1-m1-cA_7d7o-a1-m2-cB
18 7d7o-a1-m2-cB 377 49 0.1717 0.0451 0.3469 1.5 7d7o-a1-m1-cA_7d7o-a1-m2-cB, 7d7o-a1-m1-cB_7d7o-a1-m2-cB, 7d7o-a1-m2-cA_7d7o-a1-m2-cB
19 7d7o-a1-m1-cB 377 49 0.1717 0.0451 0.3469 1.5 7d7o-a1-m1-cB_7d7o-a1-m2-cB
20 3t9q-a3-m1-cA 216 20 0.1010 0.0463 0.5000 4.6 3t9q-a3-m1-cA_3t9q-a3-m2-cB
21 3t9q-a2-m1-cA 216 20 0.1010 0.0463 0.5000 4.6 3t9q-a2-m1-cA_3t9q-a2-m1-cB
22 3t9q-a1-m2-cA 216 20 0.1010 0.0463 0.5000 4.6 3t9q-a1-m1-cA_3t9q-a1-m2-cA
23 3t9q-a1-m1-cA 216 20 0.1010 0.0463 0.5000 4.6 3t9q-a1-m1-cA_3t9q-a1-m2-cA
24 3t9q-a3-m2-cB 227 20 0.1010 0.0441 0.5000 4.8 3t9q-a3-m1-cA_3t9q-a3-m2-cB
25 3t9q-a2-m1-cB 227 20 0.1010 0.0441 0.5000 4.8 3t9q-a2-m1-cA_3t9q-a2-m1-cB
26 5ucg-a3-m1-cC 331 20 0.1010 0.0302 0.5000 5.8 5ucg-a3-m1-cC_5ucg-a3-m1-cD
27 5ucg-a3-m1-cD 334 20 0.1010 0.0299 0.5000 5.8 5ucg-a3-m1-cC_5ucg-a3-m1-cD
28 6s8f-a1-m1-cH 2571 73 0.2020 0.0078 0.2740 6.4 6s8f-a1-m1-cF_6s8f-a1-m1-cH
29 6s8f-a1-m1-cF 2571 73 0.2020 0.0078 0.2740 6.4 6s8f-a1-m1-cF_6s8f-a1-m1-cH

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Reference:
Jacob Schwartz et al.

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