Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=69)
HLNVLAKALYDNVAESPDELSFRKGDIMTVLEQDTQGLDGWWLCSLHGRQGIVPGNRLKI
LVGMYDKKP

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Dimers
1 1wyx-a1-m1-cB 69 69 1.0000 1.0000 1.0000 1.34e-47 1wyx-a1-m1-cA_1wyx-a1-m1-cB
2 1wyx-a1-m1-cA 68 68 0.9855 1.0000 1.0000 1.82e-46 1wyx-a1-m1-cA_1wyx-a1-m1-cB
3 6a9c-a1-m1-cA 59 54 0.3623 0.4237 0.4630 3.05e-11 6a9c-a1-m1-cA_6a9c-a1-m1-cB
4 6a9c-a1-m1-cB 66 54 0.3623 0.3788 0.4630 3.39e-11 6a9c-a1-m1-cA_6a9c-a1-m1-cB
5 6gbu-a1-m1-cG 54 49 0.3043 0.3889 0.4286 6.19e-09 6gbu-a1-m1-cE_6gbu-a1-m1-cG
6 2d1x-a2-m1-cD 59 59 0.3478 0.4068 0.4068 7.90e-08 2d1x-a2-m1-cD_2d1x-a2-m1-cC
7 2d1x-a2-m1-cC 66 59 0.3478 0.3636 0.4068 1.03e-07 2d1x-a2-m1-cD_2d1x-a2-m1-cC
8 4iim-a1-m1-cB 55 56 0.3043 0.3818 0.3750 1.51e-07 4iim-a1-m1-cB_4iim-a1-m1-cA
9 2d0n-a1-m1-cC 56 57 0.3043 0.3750 0.3684 1.64e-07 2d0n-a1-m1-cC_2d0n-a1-m1-cA
10 4iim-a1-m1-cA 57 56 0.3043 0.3684 0.3750 1.70e-07 4iim-a1-m1-cB_4iim-a1-m1-cA
11 2d0n-a1-m1-cA 59 57 0.3043 0.3559 0.3684 1.77e-07 2d0n-a1-m1-cC_2d0n-a1-m1-cA
12 4iio-a1-m1-cB 57 56 0.3188 0.3860 0.3929 2.69e-07 4iio-a1-m1-cB_4iio-a1-m1-cA
13 6cq7-a2-m2-cA 73 59 0.3333 0.3151 0.3898 2.83e-07 6cq7-a2-m1-cA_6cq7-a2-m2-cA
14 6cq7-a2-m1-cA 73 59 0.3333 0.3151 0.3898 2.83e-07 6cq7-a2-m1-cA_6cq7-a2-m2-cA
15 4iio-a1-m1-cA 63 56 0.3188 0.3492 0.3929 3.03e-07 4iio-a1-m1-cB_4iio-a1-m1-cA
16 5k26-a1-m1-cA 77 56 0.3333 0.2987 0.4107 3.75e-07 5k26-a1-m1-cB_5k26-a1-m1-cA
17 1jqq-a1-m1-cD 73 61 0.3478 0.3288 0.3934 6.41e-07 1jqq-a1-m1-cC_1jqq-a1-m1-cD, 1jqq-a1-m1-cD_1jqq-a1-m1-cA
18 6aqb-a1-m2-cB 70 51 0.3188 0.3143 0.4314 6.55e-07 6aqb-a1-m1-cA_6aqb-a1-m2-cB
19 6aqb-a1-m1-cA 70 51 0.3188 0.3143 0.4314 6.55e-07 6aqb-a1-m1-cA_6aqb-a1-m2-cB
20 2sem-a1-m1-cB 59 52 0.2609 0.3051 0.3462 6.57e-07 2sem-a1-m1-cA_2sem-a1-m1-cB
21 2sem-a1-m1-cA 58 52 0.2609 0.3103 0.3462 7.17e-07 2sem-a1-m1-cA_2sem-a1-m1-cB
22 1jqq-a1-m1-cB 82 61 0.3478 0.2927 0.3934 7.49e-07 1jqq-a1-m1-cA_1jqq-a1-m1-cB
23 1jqq-a1-m1-cA 79 61 0.3478 0.3038 0.3934 7.84e-07 1jqq-a1-m1-cA_1jqq-a1-m1-cB, 1jqq-a1-m1-cD_1jqq-a1-m1-cA
24 5k26-a1-m1-cB 75 51 0.3188 0.2933 0.4314 8.77e-07 5k26-a1-m1-cB_5k26-a1-m1-cA
25 1z9z-a5-m5-cB 60 52 0.2899 0.3333 0.3846 3.12e-06 1z9z-a5-m1-cB_1z9z-a5-m5-cB
26 1z9z-a5-m1-cB 60 52 0.2899 0.3333 0.3846 3.12e-06 1z9z-a5-m1-cB_1z9z-a5-m5-cB
27 1z9z-a4-m4-cB 60 52 0.2899 0.3333 0.3846 3.12e-06 1z9z-a4-m1-cA_1z9z-a4-m4-cB
28 1z9z-a4-m1-cA 60 52 0.2899 0.3333 0.3846 3.12e-06 1z9z-a4-m1-cA_1z9z-a4-m4-cB
29 5sxp-a2-m1-cD 60 56 0.2754 0.3167 0.3393 6.14e-06 5sxp-a2-m1-cD_5sxp-a2-m1-cB
30 5sxp-a2-m1-cB 61 56 0.2754 0.3115 0.3393 6.41e-06 5sxp-a2-m1-cD_5sxp-a2-m1-cB
31 2oaw-a5-m4-cD 65 65 0.3333 0.3538 0.3538 7.94e-06 2oaw-a5-m1-cB_2oaw-a5-m4-cD, 2oaw-a5-m3-cC_2oaw-a5-m4-cD
32 2oaw-a5-m3-cC 65 65 0.3333 0.3538 0.3538 7.94e-06 2oaw-a5-m3-cC_2oaw-a5-m4-cD
33 2oaw-a5-m1-cB 65 65 0.3333 0.3538 0.3538 7.94e-06 2oaw-a5-m1-cB_2oaw-a5-m4-cD
34 1i07-a1-m1-cB 59 57 0.3188 0.3729 0.3860 4.17e-05 1i07-a1-m1-cA_1i07-a1-m1-cB
35 1i07-a1-m1-cA 59 57 0.3188 0.3729 0.3860 4.17e-05 1i07-a1-m1-cA_1i07-a1-m1-cB
36 2esw-a3-m1-cB 57 56 0.2609 0.3158 0.3214 5.20e-05 2esw-a3-m1-cB_2esw-a3-m1-cA
37 1bu1-a1-m1-cC 56 55 0.3333 0.4107 0.4182 5.62e-05 1bu1-a1-m1-cC_1bu1-a1-m1-cE
38 1jqq-a1-m1-cC 70 60 0.3333 0.3286 0.3833 5.64e-05 1jqq-a1-m1-cC_1jqq-a1-m1-cD
39 2p4r-a2-m2-cA 55 55 0.2609 0.3273 0.3273 5.75e-05 2p4r-a2-m1-cA_2p4r-a2-m2-cA
40 2p4r-a2-m1-cA 55 55 0.2609 0.3273 0.3273 5.75e-05 2p4r-a2-m1-cA_2p4r-a2-m2-cA
41 2ak5-a1-m2-cA 60 56 0.2609 0.3000 0.3214 5.78e-05 2ak5-a1-m2-cA_2ak5-a1-m2-cB
42 2esw-a3-m1-cA 60 56 0.2609 0.3000 0.3214 5.97e-05 2esw-a3-m1-cB_2esw-a3-m1-cA
43 1ov3-a2-m2-cB 127 55 0.2319 0.1260 0.2909 6.09e-05 1ov3-a2-m2-cB_1ov3-a2-m2-cA
44 1ov3-a2-m2-cB 127 42 0.1884 0.1024 0.3095 9.4 1ov3-a2-m2-cB_1ov3-a2-m2-cA
45 2ak5-a1-m2-cB 64 56 0.2609 0.2812 0.3214 6.14e-05 2ak5-a1-m2-cA_2ak5-a1-m2-cB
46 1bu1-a1-m1-cE 57 55 0.3333 0.4035 0.4182 6.26e-05 1bu1-a1-m1-cC_1bu1-a1-m1-cE
47 1ov3-a2-m2-cA 134 55 0.2319 0.1194 0.2909 6.81e-05 1ov3-a2-m1-cA_1ov3-a2-m2-cA, 1ov3-a2-m2-cB_1ov3-a2-m2-cA
48 1ov3-a2-m2-cA 134 42 0.1884 0.0970 0.3095 9.8 1ov3-a2-m1-cA_1ov3-a2-m2-cA, 1ov3-a2-m2-cB_1ov3-a2-m2-cA
49 1ov3-a2-m1-cA 134 55 0.2319 0.1194 0.2909 6.81e-05 1ov3-a2-m1-cA_1ov3-a2-m2-cA
50 1ov3-a2-m1-cA 134 42 0.1884 0.0970 0.3095 9.8 1ov3-a2-m1-cA_1ov3-a2-m2-cA
51 4u5w-a1-m1-cB 163 56 0.3333 0.1411 0.4107 2.23e-04 4u5w-a1-m1-cD_4u5w-a1-m1-cB
52 4u5w-a1-m1-cD 160 56 0.3333 0.1437 0.4107 2.28e-04 4u5w-a1-m1-cD_4u5w-a1-m1-cB
53 7pvz-a1-m1-cB 60 53 0.2899 0.3333 0.3774 3.01e-04 7pvz-a1-m1-cA_7pvz-a1-m1-cB
54 7pvz-a1-m1-cA 60 53 0.2899 0.3333 0.3774 3.01e-04 7pvz-a1-m1-cA_7pvz-a1-m1-cB
55 2hck-a1-m1-cB 437 56 0.3333 0.0526 0.4107 3.53e-04 2hck-a1-m1-cA_2hck-a1-m1-cB
56 2hck-a1-m1-cA 437 56 0.3333 0.0526 0.4107 3.53e-04 2hck-a1-m1-cA_2hck-a1-m1-cB
57 4le9-a1-m2-cA 59 53 0.2754 0.3220 0.3585 6.67e-04 4le9-a1-m1-cA_4le9-a1-m2-cA
58 4le9-a1-m1-cA 59 53 0.2754 0.3220 0.3585 6.67e-04 4le9-a1-m1-cA_4le9-a1-m2-cA
59 3nmz-a1-m1-cC 85 59 0.2464 0.2000 0.2881 0.001 3nmz-a1-m1-cD_3nmz-a1-m1-cC
60 3nmz-a1-m1-cD 84 59 0.2464 0.2024 0.2881 0.001 3nmz-a1-m1-cD_3nmz-a1-m1-cC
61 6gbu-a1-m1-cE 42 49 0.2609 0.4286 0.3673 0.002 6gbu-a1-m1-cE_6gbu-a1-m1-cG
62 2hda-a3-m3-cA 59 53 0.2609 0.3051 0.3396 0.002 2hda-a3-m2-cA_2hda-a3-m3-cA
63 2hda-a3-m2-cA 59 53 0.2609 0.3051 0.3396 0.002 2hda-a3-m2-cA_2hda-a3-m3-cA
64 2hda-a2-m6-cA 59 53 0.2609 0.3051 0.3396 0.002 2hda-a2-m2-cA_2hda-a2-m6-cA
65 2hda-a2-m2-cA 59 53 0.2609 0.3051 0.3396 0.002 2hda-a2-m2-cA_2hda-a2-m6-cA
66 1shf-a1-m2-cB 59 56 0.3188 0.3729 0.3929 0.004 1shf-a1-m2-cA_1shf-a1-m2-cB
67 1shf-a1-m2-cA 59 56 0.3188 0.3729 0.3929 0.004 1shf-a1-m2-cA_1shf-a1-m2-cB
68 2bzy-a1-m1-cB 62 60 0.2754 0.3065 0.3167 0.012 2bzy-a1-m1-cA_2bzy-a1-m1-cB
69 2bzy-a1-m1-cA 62 60 0.2754 0.3065 0.3167 0.012 2bzy-a1-m1-cA_2bzy-a1-m1-cB
70 4xi2-a1-m2-cA 421 51 0.2319 0.0380 0.3137 0.067 4xi2-a1-m1-cA_4xi2-a1-m2-cA
71 4xi2-a1-m1-cA 421 51 0.2319 0.0380 0.3137 0.067 4xi2-a1-m1-cA_4xi2-a1-m2-cA
72 1abq-a1-m2-cA 56 54 0.2899 0.3571 0.3704 0.071 1abq-a1-m1-cA_1abq-a1-m2-cA
73 1abq-a1-m1-cA 56 54 0.2899 0.3571 0.3704 0.071 1abq-a1-m1-cA_1abq-a1-m2-cA
74 3tsw-a5-m1-cB 194 62 0.2899 0.1031 0.3226 0.14 3tsw-a5-m1-cB_3tsw-a5-m1-cD
75 3tsw-a5-m1-cD 199 62 0.2899 0.1005 0.3226 0.15 3tsw-a5-m1-cB_3tsw-a5-m1-cD
76 1opl-a3-m2-cA 451 49 0.2754 0.0421 0.3878 0.15 1opl-a3-m1-cA_1opl-a3-m2-cA
77 1opl-a3-m1-cA 451 49 0.2754 0.0421 0.3878 0.15 1opl-a3-m1-cA_1opl-a3-m2-cA
78 7m4r-a1-m1-cB 270 42 0.2319 0.0593 0.3810 0.23 7m4r-a1-m1-cB_7m4r-a1-m1-cA
79 7m4r-a1-m1-cA 360 42 0.2319 0.0444 0.3810 0.40 7m4r-a1-m1-cB_7m4r-a1-m1-cA
80 1zuy-a1-m1-cB 58 58 0.2609 0.3103 0.3103 0.47 1zuy-a1-m1-cA_1zuy-a1-m1-cB
81 1zuy-a1-m1-cA 58 58 0.2609 0.3103 0.3103 0.47 1zuy-a1-m1-cA_1zuy-a1-m1-cB
82 3eg1-a1-m1-cB 56 54 0.2754 0.3393 0.3519 0.63 3eg1-a1-m1-cB_3eg1-a1-m1-cA
83 3eg1-a1-m1-cA 58 50 0.2754 0.3276 0.3800 0.66 3eg1-a1-m1-cB_3eg1-a1-m1-cA
84 1fjh-a1-m1-cB 236 38 0.2174 0.0636 0.3947 0.74 1fjh-a1-m1-cA_1fjh-a1-m1-cB
85 1fjh-a1-m1-cA 236 38 0.2174 0.0636 0.3947 0.74 1fjh-a1-m1-cA_1fjh-a1-m1-cB
86 2iim-a1-m2-cA 62 54 0.2319 0.2581 0.2963 0.95 2iim-a1-m1-cA_2iim-a1-m2-cA
87 2iim-a1-m1-cA 62 54 0.2319 0.2581 0.2963 0.95 2iim-a1-m1-cA_2iim-a1-m2-cA
88 1x27-a1-m1-cF 163 54 0.2319 0.0982 0.2963 2.2 1x27-a1-m1-cA_1x27-a1-m1-cF, 1x27-a1-m1-cD_1x27-a1-m1-cF
89 1x27-a1-m1-cD 163 54 0.2319 0.0982 0.2963 2.2 1x27-a1-m1-cD_1x27-a1-m1-cF
90 1x27-a1-m1-cA 163 54 0.2319 0.0982 0.2963 2.2 1x27-a1-m1-cA_1x27-a1-m1-cF
91 8h07-a1-m1-cJ 107 30 0.1304 0.0841 0.3000 8.2 8h07-a1-m1-cH_8h07-a1-m1-cJ
92 8h07-a1-m1-cH 107 30 0.1304 0.0841 0.3000 8.2 8h07-a1-m1-cH_8h07-a1-m1-cJ
93 1bb9-a1-m2-cA 83 39 0.1884 0.1566 0.3333 8.5 1bb9-a1-m1-cA_1bb9-a1-m2-cA
94 1bb9-a1-m1-cA 83 39 0.1884 0.1566 0.3333 8.5 1bb9-a1-m1-cA_1bb9-a1-m2-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600