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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=80)
HLVTTATFSIGSTGLVVYDYQQLLIAYKPAPGTCCYIKIAPESIPSLEALTRKVHNFQEC
SLQFLGAVSTLCGEVPLYYI

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2yad-a2-m1-cC 80 80 1.0000 1.0000 1.0000 1.06e-54 2yad-a2-m1-cD_2yad-a2-m1-cC
2 2yad-a2-m1-cD 76 79 0.9500 1.0000 0.9620 2.79e-49 2yad-a2-m1-cD_2yad-a2-m1-cC
3 6jg3-a1-m1-cD 3477 35 0.1625 0.0037 0.3714 0.088 6jg3-a1-m1-cB_6jg3-a1-m1-cD
4 6jg3-a1-m1-cB 3477 35 0.1625 0.0037 0.3714 0.088 6jg3-a1-m1-cB_6jg3-a1-m1-cD
5 6jgz-a1-m1-cH 3485 35 0.1625 0.0037 0.3714 0.088 6jgz-a1-m1-cF_6jgz-a1-m1-cH
6 6jgz-a1-m1-cF 3485 35 0.1625 0.0037 0.3714 0.088 6jgz-a1-m1-cF_6jgz-a1-m1-cH
7 5l1d-a1-m1-cG 3570 35 0.1625 0.0036 0.3714 0.088 5l1d-a1-m1-cE_5l1d-a1-m1-cG
8 5l1d-a1-m1-cE 3570 35 0.1625 0.0036 0.3714 0.088 5l1d-a1-m1-cE_5l1d-a1-m1-cG
9 6jii-a1-m1-cK 3508 35 0.1625 0.0037 0.3714 0.090 6jii-a1-m1-cH_6jii-a1-m1-cK
10 6jii-a1-m1-cH 3508 35 0.1625 0.0037 0.3714 0.090 6jii-a1-m1-cH_6jii-a1-m1-cK
11 6ji8-a1-m1-cJ 3511 35 0.1625 0.0037 0.3714 0.090 6ji8-a1-m1-cG_6ji8-a1-m1-cJ
12 6ji8-a1-m1-cG 3511 35 0.1625 0.0037 0.3714 0.090 6ji8-a1-m1-cG_6ji8-a1-m1-cJ
13 5goa-a1-m1-cD 3423 35 0.1625 0.0038 0.3714 0.090 5goa-a1-m1-cC_5goa-a1-m1-cD
14 5goa-a1-m1-cC 3423 35 0.1625 0.0038 0.3714 0.090 5goa-a1-m1-cC_5goa-a1-m1-cD
15 6jh6-a1-m1-cH 3454 35 0.1625 0.0038 0.3714 0.090 6jh6-a1-m1-cF_6jh6-a1-m1-cH
16 6jh6-a1-m1-cF 3454 35 0.1625 0.0038 0.3714 0.090 6jh6-a1-m1-cF_6jh6-a1-m1-cH
17 6jrs-a1-m1-cJ 3488 35 0.1625 0.0037 0.3714 0.091 6jrs-a1-m1-cG_6jrs-a1-m1-cJ
18 6jrs-a1-m1-cG 3488 35 0.1625 0.0037 0.3714 0.091 6jrs-a1-m1-cG_6jrs-a1-m1-cJ
19 3eyt-a1-m1-cD 148 46 0.2000 0.1081 0.3478 4.3 3eyt-a1-m1-cD_3eyt-a1-m1-cA, 3eyt-a1-m1-cD_3eyt-a1-m1-cC
20 3eyt-a1-m1-cA 149 47 0.2000 0.1074 0.3404 4.6 3eyt-a1-m1-cA_3eyt-a1-m1-cC, 3eyt-a1-m1-cD_3eyt-a1-m1-cA
21 3eyt-a1-m1-cC 150 47 0.2000 0.1067 0.3404 4.7 3eyt-a1-m1-cA_3eyt-a1-m1-cC, 3eyt-a1-m1-cD_3eyt-a1-m1-cC

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Reference:
Jacob Schwartz et al.

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