HomodimerDB

Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB

>protein (length=88)
HMADKRAHHNALERKRRDHIKDSFHSLRDSVPSLQGEKASRAQILDKATEYIQYMRRKNH
THQQDIDDLKRQNALLEQQVRALEKARS

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Dimers
1	5eyo-a2-m2-cC	88	88	1.0000	1.0000	1.0000	1.05e-59	5eyo-a2-m1-cC_5eyo-a2-m2-cC
2	5eyo-a2-m1-cC	88	88	1.0000	1.0000	1.0000	1.05e-59	5eyo-a2-m1-cC_5eyo-a2-m2-cC
3	1r05-a1-m1-cB	87	85	0.9205	0.9310	0.9529	1.30e-53	1r05-a1-m1-cA_1r05-a1-m1-cB
4	1r05-a1-m1-cA	87	85	0.9205	0.9310	0.9529	1.30e-53	1r05-a1-m1-cA_1r05-a1-m1-cB
5	5i4z-a1-m1-cB	74	59	0.2841	0.3378	0.4237	5.34e-09	5i4z-a1-m1-cA_5i4z-a1-m1-cB
6	5i4z-a1-m1-cA	74	59	0.2841	0.3378	0.4237	5.34e-09	5i4z-a1-m1-cA_5i4z-a1-m1-cB
7	1an4-a1-m1-cB	65	60	0.2841	0.3846	0.4167	2.61e-08	1an4-a1-m1-cA_1an4-a1-m1-cB
8	1an4-a1-m1-cA	65	60	0.2841	0.3846	0.4167	2.61e-08	1an4-a1-m1-cA_1an4-a1-m1-cB
9	7rcu-a1-m1-cS	19	19	0.2045	0.9474	0.9474	8.02e-06	7rcu-a1-m1-cQ_7rcu-a1-m1-cS
10	1am9-a1-m1-cD	76	63	0.2273	0.2632	0.3175	1.46e-05	1am9-a1-m1-cD_1am9-a1-m1-cC
11	1am9-a1-m1-cC	82	63	0.2273	0.2439	0.3175	1.55e-05	1am9-a1-m1-cD_1am9-a1-m1-cC
12	7rcu-a1-m1-cQ	17	17	0.1818	0.9412	0.9412	1.81e-04	7rcu-a1-m1-cQ_7rcu-a1-m1-cS
13	7ssa-a1-m1-cL	67	67	0.2500	0.3284	0.3284	5.55e-04	7ssa-a1-m1-cK_7ssa-a1-m1-cL
14	7ssa-a1-m1-cK	67	67	0.2500	0.3284	0.3284	5.55e-04	7ssa-a1-m1-cK_7ssa-a1-m1-cL
15	7f2f-a1-m1-cB	94	79	0.2273	0.2128	0.2532	0.002	7f2f-a1-m1-cA_7f2f-a1-m1-cB
16	7f2f-a1-m1-cA	90	80	0.2273	0.2222	0.2500	0.002	7f2f-a1-m1-cA_7f2f-a1-m1-cB
17	5gnj-a2-m1-cA	74	51	0.1932	0.2297	0.3333	0.008	5gnj-a2-m1-cA_5gnj-a2-m1-cB
18	5gnj-a2-m1-cB	77	51	0.1932	0.2208	0.3333	0.008	5gnj-a2-m1-cA_5gnj-a2-m1-cB
19	1mdy-a2-m1-cD	62	53	0.1705	0.2419	0.2830	0.028	1mdy-a2-m1-cC_1mdy-a2-m1-cD
20	1mdy-a2-m1-cC	62	53	0.1705	0.2419	0.2830	0.028	1mdy-a2-m1-cC_1mdy-a2-m1-cD
21	7d8s-a2-m1-cC	184	50	0.1705	0.0815	0.3000	0.076	7d8s-a2-m1-cD_7d8s-a2-m1-cC
22	3u5v-a1-m2-cA	62	46	0.2273	0.3226	0.4348	0.083	3u5v-a1-m1-cA_3u5v-a1-m2-cA
23	3u5v-a1-m1-cA	62	46	0.2273	0.3226	0.4348	0.083	3u5v-a1-m1-cA_3u5v-a1-m2-cA
24	7d8t-a1-m1-cB	199	55	0.1818	0.0804	0.2909	0.28	7d8t-a1-m1-cA_7d8t-a1-m1-cB
25	7d8t-a1-m1-cA	199	55	0.1818	0.0804	0.2909	0.28	7d8t-a1-m1-cA_7d8t-a1-m1-cB
26	1ukl-a2-m1-cF	58	49	0.1705	0.2586	0.3061	0.38	1ukl-a2-m1-cE_1ukl-a2-m1-cF
27	1ukl-a2-m1-cE	58	49	0.1705	0.2586	0.3061	0.38	1ukl-a2-m1-cE_1ukl-a2-m1-cF
28	7z5k-a1-m1-cB	56	52	0.1364	0.2143	0.2308	1.3	7z5k-a1-m1-cA_7z5k-a1-m1-cB
29	7z5k-a1-m1-cA	56	52	0.1364	0.2143	0.2308	1.5	7z5k-a1-m1-cA_7z5k-a1-m1-cB
30	6owd-a1-m1-cB	28	22	0.1364	0.4286	0.5455	2.7	6owd-a1-m1-cA_6owd-a1-m1-cB
31	6owd-a1-m1-cA	28	22	0.1364	0.4286	0.5455	2.7	6owd-a1-m1-cA_6owd-a1-m1-cB
32	1a0a-a1-m1-cB	63	62	0.1705	0.2381	0.2419	3.5	1a0a-a1-m1-cA_1a0a-a1-m1-cB
33	1a0a-a1-m1-cA	63	62	0.1705	0.2381	0.2419	3.5	1a0a-a1-m1-cA_1a0a-a1-m1-cB
34	7mft-a1-m6-cG	1483	80	0.2273	0.0135	0.2500	5.8	7mft-a1-m2-cG_7mft-a1-m6-cG
35	7mft-a1-m2-cG	1483	80	0.2273	0.0135	0.2500	5.8	7mft-a1-m2-cG_7mft-a1-m6-cG

[Back]

Reference:
Jacob Schwartz et al.