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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=46)
HMPVPSFGEAMAYFAMVKRYLTSFPIDDRVQSHILHLEHDLVHVTR

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1ufi-a3-m1-cC 48 46 1.0000 0.9583 1.0000 3.38e-29 1ufi-a3-m1-cD_1ufi-a3-m1-cC
2 1ufi-a3-m1-cD 46 46 1.0000 1.0000 1.0000 4.55e-29 1ufi-a3-m1-cD_1ufi-a3-m1-cC
3 6fqx-a2-m1-cD 468 16 0.1739 0.0171 0.5000 0.62 6fqx-a2-m1-cC_6fqx-a2-m1-cD
4 6fqx-a2-m1-cC 468 16 0.1739 0.0171 0.5000 0.62 6fqx-a2-m1-cC_6fqx-a2-m1-cD
5 6jdc-a1-m2-cA 269 20 0.1957 0.0335 0.4500 3.4 6jdc-a1-m1-cA_6jdc-a1-m2-cA
6 6jdc-a1-m1-cA 269 20 0.1957 0.0335 0.4500 3.4 6jdc-a1-m1-cA_6jdc-a1-m2-cA
7 2aa4-a1-m1-cB 289 35 0.2826 0.0450 0.3714 4.2 2aa4-a1-m1-cA_2aa4-a1-m1-cB
8 2aa4-a1-m1-cA 289 35 0.2826 0.0450 0.3714 4.2 2aa4-a1-m1-cA_2aa4-a1-m1-cB
9 5uyy-a2-m1-cC 373 22 0.2174 0.0268 0.4545 5.0 5uyy-a2-m1-cD_5uyy-a2-m1-cC
10 5uyy-a2-m1-cD 365 22 0.2174 0.0274 0.4545 5.0 5uyy-a2-m1-cD_5uyy-a2-m1-cC

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Reference:
Jacob Schwartz et al.

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