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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=72)
HMRIEVRVDNGRVRVRNGTDRPCRVRVTAGGETREYTVNPGTELEVELSPEQQNNAEVEV
ECGNEKYRFQLG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7sko-a1-m1-cA 72 72 1.0000 1.0000 1.0000 2.07e-47 7sko-a1-m1-cD_7sko-a1-m1-cA
2 7sko-a1-m1-cD 71 71 0.9861 1.0000 1.0000 1.08e-46 7sko-a1-m1-cD_7sko-a1-m1-cA
3 7skp-a1-m1-cB 76 74 0.4167 0.3947 0.4054 1.96e-10 7skp-a1-m1-cA_7skp-a1-m1-cB
4 7skp-a1-m1-cA 70 68 0.4028 0.4143 0.4265 2.48e-09 7skp-a1-m1-cA_7skp-a1-m1-cB
5 2ctz-a3-m2-cB 421 31 0.1667 0.0285 0.3871 0.28 2ctz-a3-m1-cA_2ctz-a3-m2-cB
6 2ctz-a3-m1-cA 421 31 0.1667 0.0285 0.3871 0.28 2ctz-a3-m1-cA_2ctz-a3-m2-cB
7 2ctz-a2-m2-cB 421 31 0.1667 0.0285 0.3871 0.28 2ctz-a2-m1-cB_2ctz-a2-m2-cB, 2ctz-a2-m2-cA_2ctz-a2-m2-cB
8 2ctz-a2-m2-cA 421 31 0.1667 0.0285 0.3871 0.28 2ctz-a2-m2-cA_2ctz-a2-m2-cB
9 2ctz-a2-m1-cB 421 31 0.1667 0.0285 0.3871 0.28 2ctz-a2-m1-cB_2ctz-a2-m2-cB
10 4s12-a2-m1-cC 288 50 0.1944 0.0486 0.2800 7.3 4s12-a2-m1-cB_4s12-a2-m1-cC
11 4s12-a2-m1-cB 287 50 0.1944 0.0488 0.2800 7.7 4s12-a2-m1-cB_4s12-a2-m1-cC
12 1o60-a1-m1-cD 260 19 0.1528 0.0423 0.5789 8.6 1o60-a1-m1-cA_1o60-a1-m1-cD, 1o60-a1-m1-cB_1o60-a1-m1-cD, 1o60-a1-m1-cC_1o60-a1-m1-cD
13 1o60-a1-m1-cC 260 19 0.1528 0.0423 0.5789 8.6 1o60-a1-m1-cC_1o60-a1-m1-cD
14 1o60-a1-m1-cB 260 19 0.1528 0.0423 0.5789 8.6 1o60-a1-m1-cB_1o60-a1-m1-cD
15 1o60-a1-m1-cA 260 19 0.1528 0.0423 0.5789 8.6 1o60-a1-m1-cA_1o60-a1-m1-cD

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Reference:
Jacob Schwartz et al.

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