Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=72)
HMRIEVRVDNGRVRVRNGTDRPCRVRVTAGGETREYTVNPGTELEVELSPEQQNNAEVEV
ECGNEKYRFQLG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7sko-a1-m1-cA 72 72 1.0000 1.0000 1.0000 2.07e-47 7sko-a1-m1-cD_7sko-a1-m1-cA
2 7sko-a1-m1-cD 71 71 0.9861 1.0000 1.0000 1.08e-46 7sko-a1-m1-cD_7sko-a1-m1-cA
3 7skp-a1-m1-cB 76 74 0.4167 0.3947 0.4054 1.96e-10 7skp-a1-m1-cA_7skp-a1-m1-cB
4 7skp-a1-m1-cA 70 68 0.4028 0.4143 0.4265 2.48e-09 7skp-a1-m1-cA_7skp-a1-m1-cB
5 2ctz-a3-m2-cB 421 31 0.1667 0.0285 0.3871 0.28 2ctz-a3-m1-cA_2ctz-a3-m2-cB
6 2ctz-a3-m1-cA 421 31 0.1667 0.0285 0.3871 0.28 2ctz-a3-m1-cA_2ctz-a3-m2-cB
7 2ctz-a2-m2-cB 421 31 0.1667 0.0285 0.3871 0.28 2ctz-a2-m1-cB_2ctz-a2-m2-cB, 2ctz-a2-m2-cA_2ctz-a2-m2-cB
8 2ctz-a2-m2-cA 421 31 0.1667 0.0285 0.3871 0.28 2ctz-a2-m2-cA_2ctz-a2-m2-cB
9 2ctz-a2-m1-cB 421 31 0.1667 0.0285 0.3871 0.28 2ctz-a2-m1-cB_2ctz-a2-m2-cB
10 4s12-a2-m1-cC 288 50 0.1944 0.0486 0.2800 7.3 4s12-a2-m1-cB_4s12-a2-m1-cC
11 4s12-a2-m1-cB 287 50 0.1944 0.0488 0.2800 7.7 4s12-a2-m1-cB_4s12-a2-m1-cC
12 1o60-a1-m1-cD 260 19 0.1528 0.0423 0.5789 8.6 1o60-a1-m1-cA_1o60-a1-m1-cD, 1o60-a1-m1-cB_1o60-a1-m1-cD, 1o60-a1-m1-cC_1o60-a1-m1-cD
13 1o60-a1-m1-cC 260 19 0.1528 0.0423 0.5789 8.6 1o60-a1-m1-cC_1o60-a1-m1-cD
14 1o60-a1-m1-cB 260 19 0.1528 0.0423 0.5789 8.6 1o60-a1-m1-cB_1o60-a1-m1-cD
15 1o60-a1-m1-cA 260 19 0.1528 0.0423 0.5789 8.6 1o60-a1-m1-cA_1o60-a1-m1-cD

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600