Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=69)
HMRIVEEMVGKEVLDSSAKVIGKVKDVEVDIESQAIESLVLGKGGGETIVPYEMVKKIGD
KILLKGPEE

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1pm3-a1-m1-cA 69 69 1.0000 1.0000 1.0000 1.71e-41 1pm3-a1-m1-cB_1pm3-a1-m1-cA
2 1pm3-a1-m1-cB 68 68 0.9710 0.9853 0.9853 6.68e-40 1pm3-a1-m1-cB_1pm3-a1-m1-cA
3 6f5v-a2-m1-cC 399 47 0.2609 0.0451 0.3830 0.63 6f5v-a2-m1-cC_6f5v-a2-m1-cD
4 6f5v-a2-m1-cD 403 47 0.2609 0.0447 0.3830 0.65 6f5v-a2-m1-cC_6f5v-a2-m1-cD
5 5zum-a1-m1-cB 527 39 0.2609 0.0342 0.4615 2.5 5zum-a1-m1-cA_5zum-a1-m1-cB
6 4yap-a1-m2-cA 262 29 0.1884 0.0496 0.4483 2.6 4yap-a1-m1-cA_4yap-a1-m2-cA
7 4yap-a1-m1-cA 262 29 0.1884 0.0496 0.4483 2.6 4yap-a1-m1-cA_4yap-a1-m2-cA
8 5zum-a1-m1-cA 523 39 0.2609 0.0344 0.4615 2.8 5zum-a1-m1-cA_5zum-a1-m1-cB
9 5bq2-a1-m1-cD 424 41 0.1884 0.0307 0.3171 3.2 5bq2-a1-m1-cA_5bq2-a1-m1-cD, 5bq2-a1-m1-cB_5bq2-a1-m1-cD, 5bq2-a1-m1-cC_5bq2-a1-m1-cD
10 5bq2-a1-m1-cC 424 41 0.1884 0.0307 0.3171 3.2 5bq2-a1-m1-cC_5bq2-a1-m1-cD
11 5bq2-a1-m1-cB 424 41 0.1884 0.0307 0.3171 3.2 5bq2-a1-m1-cB_5bq2-a1-m1-cD
12 5bq2-a1-m1-cA 424 41 0.1884 0.0307 0.3171 3.2 5bq2-a1-m1-cA_5bq2-a1-m1-cD
13 3ia2-a2-m1-cF 271 43 0.2174 0.0554 0.3488 4.0 3ia2-a2-m1-cE_3ia2-a2-m1-cF
14 3ia2-a2-m1-cE 271 43 0.2174 0.0554 0.3488 4.0 3ia2-a2-m1-cE_3ia2-a2-m1-cF
15 6wfm-a1-m1-cB 416 21 0.1304 0.0216 0.4286 8.5 6wfm-a1-m1-cB_6wfm-a1-m1-cA
16 6wfm-a1-m1-cA 417 21 0.1304 0.0216 0.4286 8.6 6wfm-a1-m1-cB_6wfm-a1-m1-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600