Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=62)
HMRRMANNARERLRVRDINEAFKELGRMVQLHLKSDKPQTKLLILHQAVAVILSLEQQVR
ER

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6od5-a1-m1-cA 62 62 1.0000 1.0000 1.0000 3.12e-39 6od5-a1-m1-cB_6od5-a1-m1-cA
2 6od5-a1-m1-cB 60 60 0.9677 1.0000 1.0000 1.24e-37 6od5-a1-m1-cB_6od5-a1-m1-cA
3 6od3-a4-m1-cI 59 59 0.9516 1.0000 1.0000 8.64e-37 6od3-a4-m1-cJ_6od3-a4-m1-cI
4 6od3-a4-m1-cJ 52 52 0.8387 1.0000 1.0000 2.96e-31 6od3-a4-m1-cJ_6od3-a4-m1-cI
5 3u5v-a1-m2-cA 62 55 0.7258 0.7258 0.8182 1.24e-24 3u5v-a1-m1-cA_3u5v-a1-m2-cA
6 3u5v-a1-m1-cA 62 55 0.7258 0.7258 0.8182 1.24e-24 3u5v-a1-m1-cA_3u5v-a1-m2-cA
7 7z5k-a1-m1-cA 56 55 0.3226 0.3571 0.3636 0.010 7z5k-a1-m1-cA_7z5k-a1-m1-cB
8 7z5k-a1-m1-cB 56 55 0.3226 0.3571 0.3636 0.011 7z5k-a1-m1-cA_7z5k-a1-m1-cB
9 4rk6-a1-m1-cA 261 28 0.1935 0.0460 0.4286 0.028 4rk6-a1-m1-cB_4rk6-a1-m1-cA
10 2ql2-a3-m1-cB 59 59 0.3387 0.3559 0.3559 0.031 2ql2-a3-m1-cD_2ql2-a3-m1-cB
11 2ql2-a3-m1-cD 57 58 0.3387 0.3684 0.3621 0.033 2ql2-a3-m1-cD_2ql2-a3-m1-cB
12 1mdy-a2-m1-cD 62 59 0.3387 0.3387 0.3559 0.084 1mdy-a2-m1-cC_1mdy-a2-m1-cD
13 1mdy-a2-m1-cC 62 59 0.3387 0.3387 0.3559 0.084 1mdy-a2-m1-cC_1mdy-a2-m1-cD
14 1q3i-a2-m3-cA 192 40 0.1935 0.0625 0.3000 0.43 1q3i-a2-m2-cA_1q3i-a2-m3-cA
15 1q3i-a2-m2-cA 192 40 0.1935 0.0625 0.3000 0.43 1q3i-a2-m2-cA_1q3i-a2-m3-cA
16 6fx5-a1-m1-cB 74 45 0.2258 0.1892 0.3111 2.8 6fx5-a1-m1-cA_6fx5-a1-m1-cB
17 6fx5-a1-m1-cA 72 44 0.2258 0.1944 0.3182 4.7 6fx5-a1-m1-cA_6fx5-a1-m1-cB
18 7qpg-a1-m1-cS 2208 40 0.2419 0.0068 0.3750 7.8 7qpg-a1-m1-cR_7qpg-a1-m1-cS
19 7qpg-a1-m1-cR 2208 40 0.2419 0.0068 0.3750 7.8 7qpg-a1-m1-cR_7qpg-a1-m1-cS
20 7obz-a2-m1-cC 175 46 0.2258 0.0800 0.3043 9.3 7obz-a2-m1-cB_7obz-a2-m1-cC
21 7obz-a2-m1-cB 175 46 0.2258 0.0800 0.3043 9.3 7obz-a2-m1-cB_7obz-a2-m1-cC

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600