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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=78)
HPALRLVDPQIQLAVTRMVGPKVYPIILRLGSPLSLNMARKTLNSLEDKAFQLTPIAVQM
TKLATTEELPDEFVVVTV

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7ye8-a2-m1-cD 78 78 1.0000 1.0000 1.0000 6.69e-52 7ye8-a2-m1-cC_7ye8-a2-m1-cD
2 7ye8-a2-m1-cC 75 76 0.9487 0.9867 0.9737 4.71e-46 7ye8-a2-m1-cC_7ye8-a2-m1-cD
3 2cme-a2-m1-cD 76 76 0.7692 0.7895 0.7895 4.25e-35 2cme-a2-m1-cC_2cme-a2-m1-cD
4 2cme-a2-m1-cC 76 76 0.7692 0.7895 0.7895 4.25e-35 2cme-a2-m1-cC_2cme-a2-m1-cD
5 6sek-a1-m1-cB 504 47 0.2179 0.0337 0.3617 2.3 6sek-a1-m1-cA_6sek-a1-m1-cB
6 6sek-a1-m1-cA 504 47 0.2179 0.0337 0.3617 2.3 6sek-a1-m1-cA_6sek-a1-m1-cB
7 4b9b-a2-m1-cB 435 32 0.1667 0.0299 0.4062 3.8 4b9b-a2-m1-cB_4b9b-a2-m1-cH
8 4b9b-a2-m1-cH 436 32 0.1667 0.0298 0.4062 3.8 4b9b-a2-m1-cB_4b9b-a2-m1-cH, 4b9b-a2-m1-cG_4b9b-a2-m1-cH
9 4b9b-a2-m1-cG 436 32 0.1667 0.0298 0.4062 3.8 4b9b-a2-m1-cG_4b9b-a2-m1-cH
10 1x31-a3-m3-cA 963 64 0.1923 0.0156 0.2344 7.3 1x31-a3-m1-cA_1x31-a3-m3-cA
11 1x31-a3-m1-cA 963 64 0.1923 0.0156 0.2344 7.3 1x31-a3-m1-cA_1x31-a3-m3-cA
12 1x31-a2-m2-cA 963 64 0.1923 0.0156 0.2344 7.3 1x31-a2-m1-cA_1x31-a2-m2-cA
13 1x31-a2-m1-cA 963 64 0.1923 0.0156 0.2344 7.3 1x31-a2-m1-cA_1x31-a2-m2-cA

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Reference:
Jacob Schwartz et al.

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