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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=77)
HPEVKIKTILSLFLNINIDDFNMDANLADAYDMDSTELADLAKEIEKEFGISVTKSQFSH
WETGRAVLDFVSSSLND

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6sm4-a1-m1-cB 77 77 1.0000 1.0000 1.0000 7.26e-52 6sm4-a1-m1-cB_6sm4-a1-m1-cA
2 6sm4-a1-m1-cA 78 77 1.0000 0.9872 1.0000 8.17e-52 6sm4-a1-m1-cB_6sm4-a1-m1-cA
3 4pww-a1-m2-cA 85 48 0.1688 0.1529 0.2708 0.031 4pww-a1-m1-cA_4pww-a1-m2-cA
4 4pww-a1-m1-cA 85 48 0.1688 0.1529 0.2708 0.031 4pww-a1-m1-cA_4pww-a1-m2-cA
5 6zv9-a1-m1-cA 166 43 0.1688 0.0783 0.3023 0.17 6zv9-a1-m1-cA_6zv9-a1-m1-cB
6 6zv9-a1-m1-cB 169 43 0.1688 0.0769 0.3023 0.17 6zv9-a1-m1-cA_6zv9-a1-m1-cB
7 4rjv-a2-m1-cC 79 20 0.1429 0.1392 0.5500 1.6 4rjv-a2-m1-cC_4rjv-a2-m1-cD
8 4rjv-a2-m1-cD 83 20 0.1429 0.1325 0.5500 1.6 4rjv-a2-m1-cC_4rjv-a2-m1-cD
9 7jwk-a2-m1-cC 333 47 0.2078 0.0480 0.3404 2.1 7jwk-a2-m1-cD_7jwk-a2-m1-cC
10 3hsr-a1-m1-cA 130 41 0.1818 0.1077 0.3415 2.2 3hsr-a1-m1-cA_3hsr-a1-m1-cB
11 7jwk-a2-m1-cD 328 47 0.2078 0.0488 0.3404 2.2 7jwk-a2-m1-cD_7jwk-a2-m1-cC
12 3hsr-a1-m1-cB 133 41 0.1818 0.1053 0.3415 2.4 3hsr-a1-m1-cA_3hsr-a1-m1-cB
13 2rhs-a1-m1-cB 786 69 0.2208 0.0216 0.2464 2.5 2rhs-a1-m1-cD_2rhs-a1-m1-cB
14 2fae-a8-m5-cB 77 71 0.1818 0.1818 0.1972 2.5 2fae-a8-m1-cA_2fae-a8-m5-cB
15 2fae-a8-m1-cA 77 71 0.1818 0.1818 0.1972 2.5 2fae-a8-m1-cA_2fae-a8-m5-cB
16 2fae-a3-m4-cB 77 71 0.1818 0.1818 0.1972 2.5 2fae-a3-m1-cA_2fae-a3-m4-cB
17 2fae-a3-m1-cA 77 71 0.1818 0.1818 0.1972 2.5 2fae-a3-m1-cA_2fae-a3-m4-cB
18 2fad-a3-m2-cB 77 71 0.1818 0.1818 0.1972 2.5 2fad-a3-m1-cA_2fad-a3-m2-cB
19 2fad-a3-m1-cA 77 71 0.1818 0.1818 0.1972 2.5 2fad-a3-m1-cA_2fad-a3-m2-cB
20 1vrd-a2-m4-cB 317 65 0.2857 0.0694 0.3385 3.0 1vrd-a2-m2-cB_1vrd-a2-m4-cB
21 1vrd-a2-m2-cB 317 65 0.2857 0.0694 0.3385 3.0 1vrd-a2-m2-cB_1vrd-a2-m4-cB
22 2rhs-a1-m1-cD 785 69 0.2208 0.0217 0.2464 4.3 2rhs-a1-m1-cD_2rhs-a1-m1-cB
23 4mjm-a1-m1-cD 328 57 0.2338 0.0549 0.3158 5.3 4mjm-a1-m1-cD_4mjm-a1-m1-cC
24 4mjm-a1-m1-cC 329 57 0.2338 0.0547 0.3158 5.3 4mjm-a1-m1-cD_4mjm-a1-m1-cC
25 3tsd-a2-m4-cB 426 57 0.2338 0.0423 0.3158 5.4 3tsd-a2-m2-cB_3tsd-a2-m4-cB
26 3tsd-a2-m2-cB 426 57 0.2338 0.0423 0.3158 5.4 3tsd-a2-m2-cB_3tsd-a2-m4-cB
27 3tsb-a2-m4-cB 434 57 0.2338 0.0415 0.3158 5.4 3tsb-a2-m2-cB_3tsb-a2-m4-cB
28 3tsb-a2-m2-cB 434 57 0.2338 0.0415 0.3158 5.4 3tsb-a2-m2-cB_3tsb-a2-m4-cB
29 3tsb-a1-m4-cA 490 57 0.2338 0.0367 0.3158 5.8 3tsb-a1-m2-cA_3tsb-a1-m4-cA
30 3tsb-a1-m2-cA 490 57 0.2338 0.0367 0.3158 5.8 3tsb-a1-m2-cA_3tsb-a1-m4-cA
31 5mlv-a1-m1-cR 430 58 0.1688 0.0302 0.2241 6.3 5mlv-a1-m1-cF_5mlv-a1-m1-cR
32 5mlv-a1-m1-cF 430 58 0.1688 0.0302 0.2241 6.3 5mlv-a1-m1-cF_5mlv-a1-m1-cR
33 3hja-a1-m1-cD 334 47 0.2208 0.0509 0.3617 7.8 3hja-a1-m1-cA_3hja-a1-m1-cD, 3hja-a1-m1-cB_3hja-a1-m1-cD, 3hja-a1-m1-cC_3hja-a1-m1-cD
34 3hja-a1-m1-cC 334 47 0.2208 0.0509 0.3617 7.8 3hja-a1-m1-cC_3hja-a1-m1-cD
35 3hja-a1-m1-cB 334 47 0.2208 0.0509 0.3617 7.8 3hja-a1-m1-cB_3hja-a1-m1-cD
36 3hja-a1-m1-cA 334 47 0.2208 0.0509 0.3617 7.8 3hja-a1-m1-cA_3hja-a1-m1-cD
37 3lmo-a1-m2-cA 94 56 0.1688 0.1383 0.2321 7.8 3lmo-a1-m1-cA_3lmo-a1-m2-cA
38 3lmo-a1-m1-cA 94 56 0.1688 0.1383 0.2321 7.8 3lmo-a1-m1-cA_3lmo-a1-m2-cA
39 6kw1-a1-m1-cB 231 23 0.1299 0.0433 0.4348 8.4 6kw1-a1-m1-cA_6kw1-a1-m1-cB
40 6kw1-a1-m1-cA 231 23 0.1299 0.0433 0.4348 8.4 6kw1-a1-m1-cA_6kw1-a1-m1-cB
41 6bm9-a2-m1-cD 225 23 0.1299 0.0444 0.4348 8.8 6bm9-a2-m1-cC_6bm9-a2-m1-cD
42 6bm9-a2-m1-cC 224 23 0.1299 0.0446 0.4348 9.0 6bm9-a2-m1-cC_6bm9-a2-m1-cD
43 1xgs-a1-m1-cB 295 58 0.2208 0.0576 0.2931 9.7 1xgs-a1-m1-cA_1xgs-a1-m1-cB
44 1xgs-a1-m1-cA 295 58 0.2208 0.0576 0.2931 9.7 1xgs-a1-m1-cA_1xgs-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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