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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=78)
HPEVKIKTILSLFLNINIDDFNMDANLADAYDMDSTELADLAKEIEKEFGISVTKSQFSH
WETGRAVLDFVSSSLNDK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6sm4-a1-m1-cA 78 78 1.0000 1.0000 1.0000 1.29e-52 6sm4-a1-m1-cB_6sm4-a1-m1-cA
2 6sm4-a1-m1-cB 77 77 0.9872 1.0000 1.0000 8.27e-52 6sm4-a1-m1-cB_6sm4-a1-m1-cA
3 4pww-a1-m2-cA 85 48 0.1667 0.1529 0.2708 0.033 4pww-a1-m1-cA_4pww-a1-m2-cA
4 4pww-a1-m1-cA 85 48 0.1667 0.1529 0.2708 0.033 4pww-a1-m1-cA_4pww-a1-m2-cA
5 6zv9-a1-m1-cB 169 43 0.1667 0.0769 0.3023 0.18 6zv9-a1-m1-cA_6zv9-a1-m1-cB
6 6zv9-a1-m1-cA 166 43 0.1667 0.0783 0.3023 0.18 6zv9-a1-m1-cA_6zv9-a1-m1-cB
7 4rjv-a2-m1-cC 79 20 0.1410 0.1392 0.5500 1.7 4rjv-a2-m1-cC_4rjv-a2-m1-cD
8 4rjv-a2-m1-cD 83 20 0.1410 0.1325 0.5500 1.8 4rjv-a2-m1-cC_4rjv-a2-m1-cD
9 7jwk-a2-m1-cC 333 47 0.2051 0.0480 0.3404 2.3 7jwk-a2-m1-cD_7jwk-a2-m1-cC
10 7jwk-a2-m1-cD 328 47 0.2051 0.0488 0.3404 2.3 7jwk-a2-m1-cD_7jwk-a2-m1-cC
11 3hsr-a1-m1-cA 130 41 0.1795 0.1077 0.3415 2.3 3hsr-a1-m1-cA_3hsr-a1-m1-cB
12 3hsr-a1-m1-cB 133 41 0.1795 0.1053 0.3415 2.5 3hsr-a1-m1-cA_3hsr-a1-m1-cB
13 2fae-a8-m5-cB 77 71 0.1795 0.1818 0.1972 2.5 2fae-a8-m1-cA_2fae-a8-m5-cB
14 2fae-a8-m1-cA 77 71 0.1795 0.1818 0.1972 2.5 2fae-a8-m1-cA_2fae-a8-m5-cB
15 2fae-a3-m4-cB 77 71 0.1795 0.1818 0.1972 2.5 2fae-a3-m1-cA_2fae-a3-m4-cB
16 2fae-a3-m1-cA 77 71 0.1795 0.1818 0.1972 2.5 2fae-a3-m1-cA_2fae-a3-m4-cB
17 2fad-a3-m2-cB 77 71 0.1795 0.1818 0.1972 2.5 2fad-a3-m1-cA_2fad-a3-m2-cB
18 2fad-a3-m1-cA 77 71 0.1795 0.1818 0.1972 2.5 2fad-a3-m1-cA_2fad-a3-m2-cB
19 2rhs-a1-m1-cB 786 69 0.2179 0.0216 0.2464 2.7 2rhs-a1-m1-cD_2rhs-a1-m1-cB
20 1vrd-a2-m4-cB 317 65 0.2821 0.0694 0.3385 3.1 1vrd-a2-m2-cB_1vrd-a2-m4-cB
21 1vrd-a2-m2-cB 317 65 0.2821 0.0694 0.3385 3.1 1vrd-a2-m2-cB_1vrd-a2-m4-cB
22 5eyv-a1-m2-cB 420 35 0.1282 0.0238 0.2857 4.1 5eyv-a1-m1-cB_5eyv-a1-m2-cB, 5eyv-a1-m2-cB_5eyv-a1-m2-cA
23 5eyv-a1-m1-cB 420 35 0.1282 0.0238 0.2857 4.1 5eyv-a1-m1-cB_5eyv-a1-m2-cA, 5eyv-a1-m1-cB_5eyv-a1-m2-cB
24 2rhs-a1-m1-cD 785 69 0.2179 0.0217 0.2464 4.1 2rhs-a1-m1-cD_2rhs-a1-m1-cB
25 5eyt-a1-m4-cA 472 35 0.1282 0.0212 0.2857 4.4 5eyt-a1-m2-cA_5eyt-a1-m4-cA, 5eyt-a1-m3-cA_5eyt-a1-m4-cA
26 5eyt-a1-m3-cA 472 35 0.1282 0.0212 0.2857 4.4 5eyt-a1-m3-cA_5eyt-a1-m4-cA
27 5eyt-a1-m2-cA 472 35 0.1282 0.0212 0.2857 4.4 5eyt-a1-m2-cA_5eyt-a1-m4-cA
28 5eyv-a1-m2-cA 466 35 0.1282 0.0215 0.2857 4.5 5eyv-a1-m1-cB_5eyv-a1-m2-cA, 5eyv-a1-m2-cB_5eyv-a1-m2-cA
29 4mjm-a1-m1-cD 328 57 0.2308 0.0549 0.3158 5.4 4mjm-a1-m1-cD_4mjm-a1-m1-cC
30 4mjm-a1-m1-cC 329 57 0.2308 0.0547 0.3158 5.4 4mjm-a1-m1-cD_4mjm-a1-m1-cC
31 3tsd-a2-m4-cB 426 57 0.2308 0.0423 0.3158 5.6 3tsd-a2-m2-cB_3tsd-a2-m4-cB
32 3tsd-a2-m2-cB 426 57 0.2308 0.0423 0.3158 5.6 3tsd-a2-m2-cB_3tsd-a2-m4-cB
33 3tsb-a2-m4-cB 434 57 0.2308 0.0415 0.3158 5.6 3tsb-a2-m2-cB_3tsb-a2-m4-cB
34 3tsb-a2-m2-cB 434 57 0.2308 0.0415 0.3158 5.6 3tsb-a2-m2-cB_3tsb-a2-m4-cB
35 3tsb-a1-m4-cA 490 57 0.2308 0.0367 0.3158 6.0 3tsb-a1-m2-cA_3tsb-a1-m4-cA
36 3tsb-a1-m2-cA 490 57 0.2308 0.0367 0.3158 6.0 3tsb-a1-m2-cA_3tsb-a1-m4-cA
37 5mlv-a1-m1-cR 430 58 0.1667 0.0302 0.2241 6.3 5mlv-a1-m1-cF_5mlv-a1-m1-cR
38 5mlv-a1-m1-cF 430 58 0.1667 0.0302 0.2241 6.3 5mlv-a1-m1-cF_5mlv-a1-m1-cR
39 3hja-a1-m1-cD 334 47 0.2179 0.0509 0.3617 7.2 3hja-a1-m1-cA_3hja-a1-m1-cD, 3hja-a1-m1-cB_3hja-a1-m1-cD, 3hja-a1-m1-cC_3hja-a1-m1-cD
40 3hja-a1-m1-cC 334 47 0.2179 0.0509 0.3617 7.2 3hja-a1-m1-cC_3hja-a1-m1-cD
41 3hja-a1-m1-cB 334 47 0.2179 0.0509 0.3617 7.2 3hja-a1-m1-cB_3hja-a1-m1-cD
42 3hja-a1-m1-cA 334 47 0.2179 0.0509 0.3617 7.2 3hja-a1-m1-cA_3hja-a1-m1-cD
43 3lmo-a1-m2-cA 94 56 0.1667 0.1383 0.2321 7.4 3lmo-a1-m1-cA_3lmo-a1-m2-cA
44 3lmo-a1-m1-cA 94 56 0.1667 0.1383 0.2321 7.4 3lmo-a1-m1-cA_3lmo-a1-m2-cA
45 6kw1-a1-m1-cB 231 23 0.1282 0.0433 0.4348 8.7 6kw1-a1-m1-cA_6kw1-a1-m1-cB
46 6kw1-a1-m1-cA 231 23 0.1282 0.0433 0.4348 8.7 6kw1-a1-m1-cA_6kw1-a1-m1-cB
47 6bm9-a2-m1-cD 225 23 0.1282 0.0444 0.4348 8.8 6bm9-a2-m1-cC_6bm9-a2-m1-cD
48 6bm9-a2-m1-cC 224 23 0.1282 0.0446 0.4348 9.2 6bm9-a2-m1-cC_6bm9-a2-m1-cD
49 6rd5-a1-m2-c1 595 38 0.1795 0.0235 0.3684 9.9 6rd5-a1-m1-c1_6rd5-a1-m2-c1
50 6rd5-a1-m1-c1 595 38 0.1795 0.0235 0.3684 9.9 6rd5-a1-m1-c1_6rd5-a1-m2-c1

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Reference:
Jacob Schwartz et al.

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