Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=78)
HPPRIAIQYCTQCQWLLRAAWAQELLSTFGADLGEVALVPGTGGVFRIHYNGAPLWDREV
DGGFPEAKVLKQRVRDHL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2ojl-a1-m2-cA 78 78 1.0000 1.0000 1.0000 1.18e-54 2ojl-a1-m2-cB_2ojl-a1-m2-cA
2 2ojl-a1-m1-cA 78 78 1.0000 1.0000 1.0000 1.18e-54 2ojl-a1-m2-cB_2ojl-a1-m1-cA
3 2ojl-a1-m2-cB 76 76 0.9744 1.0000 1.0000 1.19e-52 2ojl-a1-m2-cB_2ojl-a1-m1-cA, 2ojl-a1-m2-cB_2ojl-a1-m2-cA
4 2oka-a1-m1-cD 84 77 0.7179 0.6667 0.7273 8.44e-36 2oka-a1-m1-cA_2oka-a1-m1-cD, 2oka-a1-m1-cC_2oka-a1-m1-cD
5 2oka-a1-m1-cC 84 77 0.7179 0.6667 0.7273 8.44e-36 2oka-a1-m1-cC_2oka-a1-m1-cD
6 2oka-a1-m1-cA 84 77 0.7179 0.6667 0.7273 8.44e-36 2oka-a1-m1-cA_2oka-a1-m1-cD
7 2obk-a2-m1-cE 80 77 0.6923 0.6750 0.7013 2.57e-35 2obk-a2-m1-cE_2obk-a2-m1-cH
8 2obk-a1-m1-cB 85 79 0.6923 0.6353 0.6835 2.57e-35 2obk-a1-m1-cA_2obk-a1-m1-cB
9 2obk-a1-m1-cA 84 79 0.6923 0.6429 0.6835 2.61e-35 2obk-a1-m1-cA_2obk-a1-m1-cB
10 2obk-a2-m1-cH 83 77 0.6923 0.6506 0.7013 2.62e-35 2obk-a2-m1-cE_2obk-a2-m1-cH
11 2fa8-a1-m1-cD 80 76 0.6154 0.6000 0.6316 6.77e-34 2fa8-a1-m1-cC_2fa8-a1-m1-cD
12 2fa8-a1-m1-cC 80 76 0.6154 0.6000 0.6316 7.72e-34 2fa8-a1-m1-cC_2fa8-a1-m1-cB, 2fa8-a1-m1-cC_2fa8-a1-m1-cD
13 2fa8-a1-m1-cB 86 74 0.6154 0.5581 0.6486 1.42e-33 2fa8-a1-m1-cC_2fa8-a1-m1-cB
14 2p0g-a1-m1-cC 79 77 0.5769 0.5696 0.5844 3.74e-25 2p0g-a1-m1-cC_2p0g-a1-m1-cD
15 2p0g-a1-m1-cA 77 74 0.5769 0.5844 0.6081 4.98e-25 2p0g-a1-m1-cA_2p0g-a1-m1-cD
16 2p0g-a1-m1-cD 79 74 0.5769 0.5696 0.6081 7.38e-25 2p0g-a1-m1-cA_2p0g-a1-m1-cD, 2p0g-a1-m1-cC_2p0g-a1-m1-cD
17 3dex-a4-m1-cH 83 79 0.5513 0.5181 0.5443 4.26e-24 3dex-a4-m1-cG_3dex-a4-m1-cH
18 3dex-a4-m1-cG 77 76 0.5385 0.5455 0.5526 1.14e-23 3dex-a4-m1-cG_3dex-a4-m1-cH
19 1q40-a3-m1-cA 163 46 0.1667 0.0798 0.2826 3.9 1q40-a3-m2-cC_1q40-a3-m1-cA
20 1q40-a3-m2-cC 162 47 0.1667 0.0802 0.2766 4.0 1q40-a3-m2-cC_1q40-a3-m1-cA
21 4woy-a3-m2-cB 329 67 0.2436 0.0578 0.2836 5.2 4woy-a3-m1-cA_4woy-a3-m2-cB
22 4woy-a3-m1-cA 329 67 0.2436 0.0578 0.2836 5.2 4woy-a3-m1-cA_4woy-a3-m2-cB
23 2z86-a2-m1-cD 594 61 0.2051 0.0269 0.2623 5.8 2z86-a2-m1-cD_2z86-a2-m1-cC
24 1mdx-a2-m2-cA 366 20 0.1154 0.0246 0.4500 7.9 1mdx-a2-m1-cA_1mdx-a2-m2-cA
25 1mdx-a2-m1-cA 366 20 0.1154 0.0246 0.4500 7.9 1mdx-a2-m1-cA_1mdx-a2-m2-cA
26 8d57-a2-m2-cF 267 40 0.1923 0.0562 0.3750 8.3 8d57-a2-m1-cE_8d57-a2-m2-cF, 8d57-a2-m1-cF_8d57-a2-m2-cF
27 8d57-a2-m1-cF 267 40 0.1923 0.0562 0.3750 8.3 8d57-a2-m1-cF_8d57-a2-m2-cF
28 8d57-a2-m1-cE 267 40 0.1923 0.0562 0.3750 8.3 8d57-a2-m1-cE_8d57-a2-m2-cF
29 3h3o-a3-m2-cC 498 58 0.2179 0.0341 0.2931 9.4 3h3o-a3-m2-cC_3h3o-a3-m1-cX
30 3h3o-a3-m1-cO 498 58 0.2179 0.0341 0.2931 9.4 3h3o-a3-m1-cO_3h3o-a3-m1-cX
31 3h3o-a3-m1-cX 499 58 0.2179 0.0341 0.2931 9.4 3h3o-a3-m1-cO_3h3o-a3-m1-cX, 3h3o-a3-m2-cC_3h3o-a3-m1-cX

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600