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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=75)
HQKPIVRVFLPNKQRTVVPARCGVTVRDSLKKALRGLIPECCAVYRIKKPIGWDTDISWL
TGEELHVEVLENVPL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3ny5-a3-m1-cD 75 75 1.0000 1.0000 1.0000 4.70e-51 3ny5-a3-m1-cD_3ny5-a3-m1-cC
2 3ny5-a2-m2-cD 75 75 1.0000 1.0000 1.0000 4.70e-51 3ny5-a2-m2-cD_3ny5-a2-m1-cC
3 3ny5-a3-m1-cC 78 75 0.9867 0.9487 0.9867 2.93e-48 3ny5-a3-m1-cD_3ny5-a3-m1-cC
4 3ny5-a2-m1-cC 78 75 0.9867 0.9487 0.9867 2.93e-48 3ny5-a2-m2-cD_3ny5-a2-m1-cC
5 6d7j-a3-m1-cD 787 42 0.2000 0.0191 0.3571 0.36 6d7j-a3-m1-cD_6d7j-a3-m1-cC
6 6d7j-a1-m1-cD 787 42 0.2000 0.0191 0.3571 0.36 6d7j-a1-m1-cD_6d7j-a1-m1-cA
7 6d7j-a1-m1-cA 799 42 0.2000 0.0188 0.3571 0.36 6d7j-a1-m1-cD_6d7j-a1-m1-cA
8 6d7j-a3-m1-cC 789 42 0.2000 0.0190 0.3571 0.38 6d7j-a3-m1-cD_6d7j-a3-m1-cC
9 4z7a-a2-m2-cA 355 36 0.1467 0.0310 0.3056 2.5 4z7a-a2-m1-cA_4z7a-a2-m2-cA
10 4z7a-a2-m1-cA 355 36 0.1467 0.0310 0.3056 2.5 4z7a-a2-m1-cA_4z7a-a2-m2-cA
11 4xxo-a1-m1-cA 186 71 0.2533 0.1022 0.2676 4.2 4xxo-a1-m1-cA_4xxo-a1-m1-cB
12 1jzt-a3-m1-cB 240 66 0.2267 0.0708 0.2576 6.2 1jzt-a3-m1-cA_1jzt-a3-m1-cB
13 1jzt-a3-m1-cA 240 66 0.2267 0.0708 0.2576 6.2 1jzt-a3-m1-cA_1jzt-a3-m1-cB

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Reference:
Jacob Schwartz et al.

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