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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=50)
HRFKVYNYMSPTFCDHCGSLLWGLVKQGLKCEDCGMNVHHKCREKVANLC

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3uey-a1-m1-cB 65 50 0.9800 0.7538 0.9800 2.70e-33 3uey-a1-m1-cA_3uey-a1-m1-cB
2 3uey-a1-m1-cA 65 50 0.9800 0.7538 0.9800 2.70e-33 3uey-a1-m1-cA_3uey-a1-m1-cB
3 1ptq-a1-m2-cA 50 50 1.0000 1.0000 1.0000 3.24e-33 1ptq-a1-m1-cA_1ptq-a1-m2-cA
4 1ptq-a1-m1-cA 50 50 1.0000 1.0000 1.0000 3.24e-33 1ptq-a1-m1-cA_1ptq-a1-m2-cA
5 4l9m-a1-m2-cA 522 50 0.5000 0.0479 0.5000 1.85e-14 4l9m-a1-m1-cA_4l9m-a1-m2-cA
6 4l9m-a1-m1-cA 522 50 0.5000 0.0479 0.5000 1.85e-14 4l9m-a1-m1-cA_4l9m-a1-m2-cA
7 6ra0-a1-m2-cA 138 50 0.4600 0.1667 0.4600 9.56e-12 6ra0-a1-m1-cA_6ra0-a1-m2-cA
8 6ra0-a1-m1-cA 138 50 0.4600 0.1667 0.4600 9.56e-12 6ra0-a1-m1-cA_6ra0-a1-m2-cA
9 4ba0-a1-m2-cA 781 24 0.1800 0.0115 0.3750 4.8 4ba0-a1-m1-cA_4ba0-a1-m2-cA
10 4ba0-a1-m1-cA 781 24 0.1800 0.0115 0.3750 4.8 4ba0-a1-m1-cA_4ba0-a1-m2-cA
11 2f2h-a1-m1-cF 773 27 0.1800 0.0116 0.3333 9.7 2f2h-a1-m1-cB_2f2h-a1-m1-cF, 2f2h-a1-m1-cE_2f2h-a1-m1-cF
12 2f2h-a1-m1-cE 773 27 0.1800 0.0116 0.3333 9.7 2f2h-a1-m1-cE_2f2h-a1-m1-cF
13 2f2h-a1-m1-cB 773 27 0.1800 0.0116 0.3333 9.7 2f2h-a1-m1-cB_2f2h-a1-m1-cF

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Reference:
Jacob Schwartz et al.

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