Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=77)
HSHLAVVGDPDFTIGFLAGISDIYEVTSDEEIVKAVEDVLKRDDVGVVIKQEYLKKLPPV
LRREIDEKVEPTFVSVG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2i4r-a2-m4-cB 77 77 1.0000 1.0000 1.0000 1.25e-49 2i4r-a2-m2-cB_2i4r-a2-m4-cB, 2i4r-a2-m3-cA_2i4r-a2-m4-cB, 2i4r-a2-m4-cA_2i4r-a2-m4-cB
2 2i4r-a2-m2-cB 77 77 1.0000 1.0000 1.0000 1.25e-49 2i4r-a2-m2-cB_2i4r-a2-m4-cB
3 2i4r-a2-m4-cA 76 76 0.9870 1.0000 1.0000 1.66e-48 2i4r-a2-m4-cA_2i4r-a2-m4-cB
4 2i4r-a2-m3-cA 76 76 0.9870 1.0000 1.0000 1.66e-48 2i4r-a2-m3-cA_2i4r-a2-m4-cB
5 6qv7-a1-m4-cA 316 60 0.2597 0.0633 0.3333 0.025 6qv7-a1-m1-cA_6qv7-a1-m4-cA, 6qv7-a1-m2-cA_6qv7-a1-m4-cA, 6qv7-a1-m3-cA_6qv7-a1-m4-cA
6 6qv7-a1-m3-cA 316 60 0.2597 0.0633 0.3333 0.025 6qv7-a1-m3-cA_6qv7-a1-m4-cA
7 6qv7-a1-m2-cA 316 60 0.2597 0.0633 0.3333 0.025 6qv7-a1-m2-cA_6qv7-a1-m4-cA
8 6qv7-a1-m1-cA 316 60 0.2597 0.0633 0.3333 0.025 6qv7-a1-m1-cA_6qv7-a1-m4-cA
9 2d00-a2-m2-cF 109 53 0.2338 0.1651 0.3396 0.89 2d00-a2-m2-cA_2d00-a2-m2-cF
10 2d00-a2-m2-cE 109 53 0.2338 0.1651 0.3396 0.89 2d00-a2-m2-cD_2d00-a2-m2-cE
11 2d00-a2-m2-cD 109 53 0.2338 0.1651 0.3396 0.89 2d00-a2-m2-cA_2d00-a2-m2-cD, 2d00-a2-m2-cD_2d00-a2-m2-cE
12 2d00-a2-m2-cA 109 53 0.2338 0.1651 0.3396 0.89 2d00-a2-m2-cA_2d00-a2-m2-cD, 2d00-a2-m2-cA_2d00-a2-m2-cF
13 3ju5-a1-m1-cA 350 23 0.1429 0.0314 0.4783 2.6 3ju5-a1-m1-cA_3ju5-a1-m1-cB
14 3ju5-a1-m1-cB 352 23 0.1429 0.0312 0.4783 2.7 3ju5-a1-m1-cA_3ju5-a1-m1-cB
15 3g2b-a1-m2-cA 90 43 0.1558 0.1333 0.2791 7.3 3g2b-a1-m1-cA_3g2b-a1-m2-cA
16 3g2b-a1-m1-cA 90 43 0.1558 0.1333 0.2791 7.3 3g2b-a1-m1-cA_3g2b-a1-m2-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600