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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=80)
HSLQDPYLNTLRKERVPVSIYLVNGIKLQGQIESFDQFVILLKNTAEEIQNGEVVRKVVS
QMVYKHAISTVVPSRPVRLP

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6xyj-a1-m1-cDDD 80 80 1.0000 1.0000 1.0000 5.21e-54 6xyj-a1-m1-cCCC_6xyj-a1-m1-cDDD
2 6xyj-a1-m1-cCCC 79 79 0.9875 1.0000 1.0000 8.61e-53 6xyj-a1-m1-cCCC_6xyj-a1-m1-cDDD
3 1hk9-a1-m1-cA 64 76 0.7500 0.9375 0.7895 1.70e-35 1hk9-a1-m1-cB_1hk9-a1-m1-cA
4 1hk9-a1-m1-cB 63 76 0.7500 0.9524 0.7895 1.73e-35 1hk9-a1-m1-cB_1hk9-a1-m1-cA
5 7og8-a1-m6-cA 68 77 0.6500 0.7647 0.6753 9.78e-32 7og8-a1-m2-cA_7og8-a1-m6-cA
6 7og8-a1-m2-cA 68 77 0.6500 0.7647 0.6753 9.78e-32 7og8-a1-m2-cA_7og8-a1-m6-cA
7 3ahu-a1-m1-cC 66 78 0.3750 0.4545 0.3846 3.27e-17 3ahu-a1-m1-cA_3ahu-a1-m1-cC
8 3ahu-a1-m1-cA 66 78 0.3750 0.4545 0.3846 3.27e-17 3ahu-a1-m1-cA_3ahu-a1-m1-cC
9 1ycy-a2-m2-cD 60 50 0.2125 0.2833 0.3400 0.19 1ycy-a2-m2-cC_1ycy-a2-m2-cD
10 1ycy-a2-m2-cC 60 50 0.2125 0.2833 0.3400 0.19 1ycy-a2-m2-cC_1ycy-a2-m2-cD
11 1ycy-a1-m4-cD 60 50 0.2125 0.2833 0.3400 0.19 1ycy-a1-m2-cC_1ycy-a1-m4-cD
12 1ycy-a1-m2-cC 60 50 0.2125 0.2833 0.3400 0.19 1ycy-a1-m2-cC_1ycy-a1-m4-cD
13 3ve9-a1-m1-cB 204 56 0.2250 0.0882 0.3214 1.9 3ve9-a1-m1-cA_3ve9-a1-m1-cB
14 3ve9-a1-m1-cA 204 56 0.2250 0.0882 0.3214 1.9 3ve9-a1-m1-cA_3ve9-a1-m1-cB
15 3vav-a1-m1-cJ 263 62 0.1750 0.0532 0.2258 2.8 3vav-a1-m1-cE_3vav-a1-m1-cJ
16 4oky-a1-m2-cC 279 41 0.1750 0.0502 0.3415 6.8 4oky-a1-m1-cC_4oky-a1-m2-cC
17 4oky-a1-m1-cC 279 41 0.1750 0.0502 0.3415 6.8 4oky-a1-m1-cC_4oky-a1-m2-cC
18 4zhj-a1-m1-cB 1233 58 0.2500 0.0162 0.3448 7.4 4zhj-a1-m1-cB_4zhj-a1-m1-cA
19 2e28-a1-m4-cA 587 46 0.2000 0.0273 0.3478 8.8 2e28-a1-m1-cA_2e28-a1-m4-cA, 2e28-a1-m2-cA_2e28-a1-m4-cA
20 2e28-a1-m2-cA 587 46 0.2000 0.0273 0.3478 8.8 2e28-a1-m2-cA_2e28-a1-m4-cA
21 2e28-a1-m1-cA 587 46 0.2000 0.0273 0.3478 8.8 2e28-a1-m1-cA_2e28-a1-m4-cA

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Reference:
Jacob Schwartz et al.

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