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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=96)
HSTPLTLIATITAAPGHAEALERELRALVAPSRAEAGCLQYDLHQDRHDSHLFYIEQWRD
DAALERHQNTEHFLRFSRGNEALLQNVKIDQLYRLA

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1x7v-a7-m3-cA 96 96 1.0000 1.0000 1.0000 2.37e-67 1x7v-a7-m3-cA_1x7v-a7-m1-cC
2 1x7v-a5-m1-cB 96 96 1.0000 1.0000 1.0000 2.37e-67 1x7v-a5-m1-cB_1x7v-a5-m1-cC
3 1x7v-a4-m2-cB 96 96 1.0000 1.0000 1.0000 2.37e-67 1x7v-a4-m2-cA_1x7v-a4-m2-cB
4 1x7v-a4-m2-cA 96 96 1.0000 1.0000 1.0000 2.37e-67 1x7v-a4-m2-cA_1x7v-a4-m2-cB
5 1x7v-a7-m1-cC 97 96 1.0000 0.9897 1.0000 2.88e-67 1x7v-a7-m3-cA_1x7v-a7-m1-cC
6 1x7v-a5-m1-cC 97 96 1.0000 0.9897 1.0000 2.88e-67 1x7v-a5-m1-cB_1x7v-a5-m1-cC
7 1y0h-a1-m1-cA 101 92 0.3021 0.2871 0.3152 1.62e-11 1y0h-a1-m1-cB_1y0h-a1-m1-cA
8 1y0h-a1-m1-cB 98 91 0.3021 0.2959 0.3187 2.56e-11 1y0h-a1-m1-cB_1y0h-a1-m1-cA
9 4dpo-a1-m1-cB 98 70 0.1979 0.1939 0.2714 6.01e-07 4dpo-a1-m1-cB_4dpo-a1-m1-cA
10 4dpo-a1-m1-cA 99 70 0.1979 0.1919 0.2714 6.89e-07 4dpo-a1-m1-cB_4dpo-a1-m1-cA
11 4zos-a2-m1-cB 97 67 0.2188 0.2165 0.3134 2.69e-06 4zos-a2-m1-cB_4zos-a2-m1-cA
12 4zos-a2-m1-cA 105 79 0.2396 0.2190 0.2911 2.83e-06 4zos-a2-m1-cB_4zos-a2-m1-cA
13 2bbe-a2-m4-cA 103 64 0.2083 0.1942 0.3125 6.74e-06 2bbe-a2-m1-cA_2bbe-a2-m4-cA
14 2bbe-a2-m1-cA 103 64 0.2083 0.1942 0.3125 6.74e-06 2bbe-a2-m1-cA_2bbe-a2-m4-cA
15 2bbe-a1-m4-cA 103 64 0.2083 0.1942 0.3125 6.74e-06 2bbe-a1-m3-cA_2bbe-a1-m4-cA
16 2bbe-a1-m3-cA 103 64 0.2083 0.1942 0.3125 6.74e-06 2bbe-a1-m3-cA_2bbe-a1-m4-cA
17 4hl9-a4-m1-cH 91 73 0.3021 0.3187 0.3973 2.40e-05 4hl9-a4-m1-cG_4hl9-a4-m1-cH
18 4hl9-a4-m1-cG 91 73 0.3021 0.3187 0.3973 2.40e-05 4hl9-a4-m1-cG_4hl9-a4-m1-cH
19 2fb0-a1-m2-cA 91 51 0.1667 0.1758 0.3137 1.48e-04 2fb0-a1-m1-cA_2fb0-a1-m2-cA
20 2fb0-a1-m1-cA 91 51 0.1667 0.1758 0.3137 1.48e-04 2fb0-a1-m1-cA_2fb0-a1-m2-cA
21 2gff-a1-m1-cB 97 42 0.1875 0.1856 0.4286 4.53e-04 2gff-a1-m1-cA_2gff-a1-m1-cB
22 2gff-a1-m1-cA 94 42 0.1875 0.1915 0.4286 4.55e-04 2gff-a1-m1-cA_2gff-a1-m1-cB
23 3bm7-a1-m2-cA 102 70 0.1979 0.1863 0.2714 7.01e-04 3bm7-a1-m1-cA_3bm7-a1-m2-cA
24 3bm7-a1-m1-cA 102 70 0.1979 0.1863 0.2714 7.01e-04 3bm7-a1-m1-cA_3bm7-a1-m2-cA
25 1tuv-a2-m3-cA 103 100 0.3125 0.2913 0.3000 0.001 1tuv-a2-m1-cA_1tuv-a2-m3-cA
26 1tuv-a2-m1-cA 103 100 0.3125 0.2913 0.3000 0.001 1tuv-a2-m1-cA_1tuv-a2-m3-cA
27 1tuv-a1-m2-cA 103 100 0.3125 0.2913 0.3000 0.001 1tuv-a1-m1-cA_1tuv-a1-m2-cA
28 1tuv-a1-m1-cA 103 100 0.3125 0.2913 0.3000 0.001 1tuv-a1-m1-cA_1tuv-a1-m2-cA
29 3kkf-a2-m6-cA 100 74 0.2083 0.2000 0.2703 0.012 3kkf-a2-m1-cA_3kkf-a2-m6-cA, 3kkf-a2-m3-cA_3kkf-a2-m6-cA
30 3kkf-a2-m3-cA 100 74 0.2083 0.2000 0.2703 0.012 3kkf-a2-m3-cA_3kkf-a2-m6-cA
31 3kkf-a2-m1-cA 100 74 0.2083 0.2000 0.2703 0.012 3kkf-a2-m1-cA_3kkf-a2-m6-cA
32 3e8o-a1-m1-cB 98 56 0.1771 0.1735 0.3036 0.54 3e8o-a1-m1-cB_3e8o-a1-m1-cA
33 3e8o-a1-m1-cA 99 56 0.1771 0.1717 0.3036 0.54 3e8o-a1-m1-cB_3e8o-a1-m1-cA
34 8big-a2-m1-cE 318 44 0.1354 0.0409 0.2955 1.2 8big-a2-m1-cB_8big-a2-m1-cE
35 8big-a2-m1-cB 318 44 0.1354 0.0409 0.2955 1.2 8big-a2-m1-cB_8big-a2-m1-cE
36 4cvh-a1-m2-cA 391 44 0.1771 0.0435 0.3864 2.1 4cvh-a1-m1-cA_4cvh-a1-m2-cA
37 4cvh-a1-m1-cA 391 44 0.1771 0.0435 0.3864 2.1 4cvh-a1-m1-cA_4cvh-a1-m2-cA
38 4dn9-a2-m2-cB 94 47 0.1667 0.1702 0.3404 2.3 4dn9-a2-m2-cB_4dn9-a2-m2-cA
39 4dn9-a2-m2-cA 95 47 0.1667 0.1684 0.3404 2.4 4dn9-a2-m1-cA_4dn9-a2-m2-cA, 4dn9-a2-m2-cB_4dn9-a2-m2-cA
40 4dn9-a2-m1-cA 95 47 0.1667 0.1684 0.3404 2.4 4dn9-a2-m1-cA_4dn9-a2-m2-cA
41 7bio-a1-m1-cA 106 72 0.2188 0.1981 0.2917 2.5 7bio-a1-m1-cA_7bio-a1-m1-cB
42 1zzh-a3-m1-cA 297 23 0.0938 0.0303 0.3913 4.0 1zzh-a3-m1-cA_1zzh-a3-m1-cD
43 1zzh-a3-m1-cD 298 23 0.0938 0.0302 0.3913 4.2 1zzh-a3-m1-cA_1zzh-a3-m1-cD, 1zzh-a3-m1-cD_1zzh-a3-m1-cC
44 1zzh-a3-m1-cC 307 23 0.0938 0.0293 0.3913 4.2 1zzh-a3-m1-cD_1zzh-a3-m1-cC
45 7bio-a1-m1-cB 111 63 0.1979 0.1712 0.3016 5.3 7bio-a1-m1-cA_7bio-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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