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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=89)
HVHSQESLQKLVNRLSRIEGHIRGVKTMVQENRPCPEVLIQVAAVRGALDRVARLILDDH
MNECITRAAAEGNIEQELAELKEALDRFL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5fmn-a1-m2-cB 89 89 1.0000 1.0000 1.0000 1.34e-60 5fmn-a1-m1-cA_5fmn-a1-m2-cB, 5fmn-a1-m2-cA_5fmn-a1-m2-cB
2 5fmn-a1-m2-cA 86 86 0.9663 1.0000 1.0000 6.37e-58 5fmn-a1-m2-cA_5fmn-a1-m2-cB
3 5fmn-a1-m1-cA 86 86 0.9663 1.0000 1.0000 6.37e-58 5fmn-a1-m1-cA_5fmn-a1-m2-cB
4 4m1p-a2-m9-cA 96 85 0.3820 0.3542 0.4000 1.37e-20 4m1p-a2-m12-cA_4m1p-a2-m9-cA
5 4m1p-a2-m12-cA 96 85 0.3820 0.3542 0.4000 1.37e-20 4m1p-a2-m12-cA_4m1p-a2-m9-cA
6 4m1p-a1-m4-cA 96 85 0.3820 0.3542 0.4000 1.37e-20 4m1p-a1-m3-cA_4m1p-a1-m4-cA
7 4m1p-a1-m3-cA 96 85 0.3820 0.3542 0.4000 1.37e-20 4m1p-a1-m3-cA_4m1p-a1-m4-cA
8 6ahx-a1-m2-cA 60 57 0.3371 0.5000 0.5263 9.39e-20 6ahx-a1-m1-cA_6ahx-a1-m2-cA
9 6ahx-a1-m1-cA 60 57 0.3371 0.5000 0.5263 9.39e-20 6ahx-a1-m1-cA_6ahx-a1-m2-cA
10 4adz-a1-m2-cB 90 80 0.3483 0.3444 0.3875 2.89e-12 4adz-a1-m2-cA_4adz-a1-m2-cB
11 4adz-a1-m2-cA 90 80 0.3483 0.3444 0.3875 2.89e-12 4adz-a1-m2-cA_4adz-a1-m2-cB
12 4uig-a1-m4-cA 91 80 0.3483 0.3407 0.3875 2.96e-12 4uig-a1-m3-cA_4uig-a1-m4-cA
13 4uig-a1-m3-cA 91 80 0.3483 0.3407 0.3875 2.96e-12 4uig-a1-m3-cA_4uig-a1-m4-cA
14 2hh7-a2-m4-cA 85 74 0.2584 0.2706 0.3108 3.03e-11 2hh7-a2-m1-cA_2hh7-a2-m4-cA, 2hh7-a2-m3-cA_2hh7-a2-m4-cA
15 2hh7-a2-m3-cA 85 74 0.2584 0.2706 0.3108 3.03e-11 2hh7-a2-m3-cA_2hh7-a2-m4-cA
16 2hh7-a2-m1-cA 85 74 0.2584 0.2706 0.3108 3.03e-11 2hh7-a2-m1-cA_2hh7-a2-m4-cA
17 5lcy-a1-m1-cD 88 61 0.2022 0.2045 0.2951 8.56e-06 5lcy-a1-m1-cA_5lcy-a1-m1-cD, 5lcy-a1-m1-cC_5lcy-a1-m1-cD
18 5lcy-a1-m1-cC 88 61 0.2022 0.2045 0.2951 8.56e-06 5lcy-a1-m1-cC_5lcy-a1-m1-cD
19 5lcy-a1-m1-cA 88 61 0.2022 0.2045 0.2951 8.56e-06 5lcy-a1-m1-cA_5lcy-a1-m1-cD
20 5lbm-a1-m1-cD 89 64 0.2360 0.2360 0.3281 8.60e-05 5lbm-a1-m1-cA_5lbm-a1-m1-cD, 5lbm-a1-m1-cB_5lbm-a1-m1-cD, 5lbm-a1-m1-cC_5lbm-a1-m1-cD
21 5lbm-a1-m1-cC 89 64 0.2360 0.2360 0.3281 8.60e-05 5lbm-a1-m1-cC_5lbm-a1-m1-cD
22 5lbm-a1-m1-cB 82 59 0.2247 0.2439 0.3390 1.05e-04 5lbm-a1-m1-cA_5lbm-a1-m1-cB, 5lbm-a1-m1-cB_5lbm-a1-m1-cD
23 5lbm-a1-m1-cA 82 59 0.2247 0.2439 0.3390 1.05e-04 5lbm-a1-m1-cA_5lbm-a1-m1-cB, 5lbm-a1-m1-cA_5lbm-a1-m1-cD
24 1uru-a1-m2-cA 215 32 0.1236 0.0512 0.3438 1.5 1uru-a1-m1-cA_1uru-a1-m2-cA
25 1uru-a1-m1-cA 215 32 0.1236 0.0512 0.3438 1.5 1uru-a1-m1-cA_1uru-a1-m2-cA
26 2x2s-a1-m1-cD 152 42 0.1461 0.0855 0.3095 1.5 2x2s-a1-m1-cC_2x2s-a1-m1-cD
27 2x2s-a1-m1-cC 148 42 0.1461 0.0878 0.3095 1.6 2x2s-a1-m1-cC_2x2s-a1-m1-cD
28 3e4o-a2-m3-cB 250 45 0.1910 0.0680 0.3778 5.1 3e4o-a2-m1-cB_3e4o-a2-m3-cB
29 3e4o-a2-m1-cB 250 45 0.1910 0.0680 0.3778 5.1 3e4o-a2-m1-cB_3e4o-a2-m3-cB
30 3e4p-a1-m1-cA 254 45 0.1910 0.0669 0.3778 5.4 3e4p-a1-m1-cB_3e4p-a1-m1-cA
31 3e4p-a1-m1-cB 253 45 0.1910 0.0672 0.3778 5.5 3e4p-a1-m1-cB_3e4p-a1-m1-cA
32 2gz3-a1-m1-cB 347 67 0.2247 0.0576 0.2985 5.9 2gz3-a1-m1-cB_2gz3-a1-m1-cD
33 3pwk-a1-m1-cA 357 67 0.2247 0.0560 0.2985 6.1 3pwk-a1-m1-cA_3pwk-a1-m1-cB
34 2gz3-a1-m1-cD 357 67 0.2247 0.0560 0.2985 6.1 2gz3-a1-m1-cB_2gz3-a1-m1-cD
35 6gqa-a1-m1-cB 60 30 0.1461 0.2167 0.4333 6.4 6gqa-a1-m1-cC_6gqa-a1-m1-cB
36 3pwk-a1-m1-cB 359 67 0.2247 0.0557 0.2985 6.6 3pwk-a1-m1-cA_3pwk-a1-m1-cB
37 7tbi-a1-m8-cN4 180 43 0.1461 0.0722 0.3023 7.0 7tbi-a1-m8-cN3_7tbi-a1-m8-cN4
38 7tbi-a1-m8-cN3 180 43 0.1461 0.0722 0.3023 7.0 7tbi-a1-m8-cN3_7tbi-a1-m8-cN4
39 2ppy-a3-m1-cD 258 36 0.1798 0.0620 0.4444 7.9 2ppy-a3-m1-cF_2ppy-a3-m1-cD
40 2ppy-a1-m1-cA 258 36 0.1798 0.0620 0.4444 7.9 2ppy-a1-m1-cF_2ppy-a1-m1-cA
41 2ppy-a3-m1-cF 257 36 0.1798 0.0623 0.4444 8.2 2ppy-a3-m1-cF_2ppy-a3-m1-cD
42 2ppy-a1-m1-cF 257 36 0.1798 0.0623 0.4444 8.2 2ppy-a1-m1-cC_2ppy-a1-m1-cF, 2ppy-a1-m1-cF_2ppy-a1-m1-cA
43 2ppy-a1-m1-cC 257 36 0.1798 0.0623 0.4444 8.2 2ppy-a1-m1-cC_2ppy-a1-m1-cF

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Reference:
Jacob Schwartz et al.

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