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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=94)
HVTLVEINVKEDKVDQFIEVFRANHLGSIREAGNLRFDVLRDEHIPTRFYIYEAYTDEAA
VAIHKTTPHYLQCVEQLAPLTGPRKKTVFIGLPG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2gff-a1-m1-cB 97 94 1.0000 0.9691 1.0000 6.74e-67 2gff-a1-m1-cA_2gff-a1-m1-cB
2 2gff-a1-m1-cA 94 94 1.0000 1.0000 1.0000 9.84e-67 2gff-a1-m1-cA_2gff-a1-m1-cB
3 3qmq-a2-m1-cC 99 93 0.7234 0.6869 0.7312 2.41e-44 3qmq-a2-m1-cB_3qmq-a2-m1-cC
4 3qmq-a2-m1-cB 97 93 0.7234 0.7010 0.7312 2.62e-44 3qmq-a2-m1-cB_3qmq-a2-m1-cC
5 2omo-a3-m1-cG 95 92 0.4574 0.4526 0.4674 6.79e-20 2omo-a3-m1-cG_2omo-a3-m1-cD
6 2omo-a3-m1-cD 100 92 0.4574 0.4300 0.4674 9.74e-20 2omo-a3-m1-cG_2omo-a3-m1-cD
7 1x7v-a7-m1-cC 97 42 0.1915 0.1856 0.4286 4.07e-04 1x7v-a7-m3-cA_1x7v-a7-m1-cC
8 1x7v-a5-m1-cC 97 42 0.1915 0.1856 0.4286 4.07e-04 1x7v-a5-m1-cB_1x7v-a5-m1-cC
9 1x7v-a7-m3-cA 96 42 0.1915 0.1875 0.4286 4.45e-04 1x7v-a7-m3-cA_1x7v-a7-m1-cC
10 1x7v-a5-m1-cB 96 42 0.1915 0.1875 0.4286 4.45e-04 1x7v-a5-m1-cB_1x7v-a5-m1-cC
11 1x7v-a4-m2-cB 96 42 0.1915 0.1875 0.4286 4.45e-04 1x7v-a4-m2-cA_1x7v-a4-m2-cB
12 1x7v-a4-m2-cA 96 42 0.1915 0.1875 0.4286 4.45e-04 1x7v-a4-m2-cA_1x7v-a4-m2-cB
13 4zos-a2-m1-cB 97 50 0.1702 0.1649 0.3200 0.001 4zos-a2-m1-cB_4zos-a2-m1-cA
14 4zos-a2-m1-cA 105 55 0.1915 0.1714 0.3273 0.001 4zos-a2-m1-cB_4zos-a2-m1-cA
15 3kkf-a2-m6-cA 100 70 0.2021 0.1900 0.2714 0.27 3kkf-a2-m1-cA_3kkf-a2-m6-cA, 3kkf-a2-m3-cA_3kkf-a2-m6-cA
16 3kkf-a2-m3-cA 100 70 0.2021 0.1900 0.2714 0.27 3kkf-a2-m3-cA_3kkf-a2-m6-cA
17 3kkf-a2-m1-cA 100 70 0.2021 0.1900 0.2714 0.27 3kkf-a2-m1-cA_3kkf-a2-m6-cA
18 1ova-a2-m1-cD 385 77 0.2447 0.0597 0.2987 0.88 1ova-a2-m1-cD_1ova-a2-m1-cC
19 1ova-a2-m1-cC 373 77 0.2447 0.0617 0.2987 0.95 1ova-a2-m1-cD_1ova-a2-m1-cC
20 2fb0-a1-m2-cA 91 85 0.2234 0.2308 0.2471 1.4 2fb0-a1-m1-cA_2fb0-a1-m2-cA
21 2fb0-a1-m1-cA 91 85 0.2234 0.2308 0.2471 1.4 2fb0-a1-m1-cA_2fb0-a1-m2-cA
22 1iuj-a2-m2-cB 103 90 0.2340 0.2136 0.2444 2.6 1iuj-a2-m1-cA_1iuj-a2-m2-cB, 1iuj-a2-m2-cA_1iuj-a2-m2-cB
23 1iuj-a2-m2-cA 102 69 0.1915 0.1765 0.2609 3.1 1iuj-a2-m1-cA_1iuj-a2-m2-cA, 1iuj-a2-m2-cA_1iuj-a2-m2-cB
24 1iuj-a2-m1-cA 102 69 0.1915 0.1765 0.2609 3.1 1iuj-a2-m1-cA_1iuj-a2-m2-cA, 1iuj-a2-m1-cA_1iuj-a2-m2-cB
25 6kga-a1-m1-cC 387 75 0.2021 0.0491 0.2533 5.0 6kga-a1-m1-cB_6kga-a1-m1-cC
26 6kga-a1-m1-cB 387 75 0.2021 0.0491 0.2533 5.0 6kga-a1-m1-cB_6kga-a1-m1-cC

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Reference:
Jacob Schwartz et al.

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