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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=89)
HVVYIGKKPVMNYVLAVITQFHEGAKEVSIKARGRAISRAVDVAEIVRNRFLKDDVDVKE
IKIGTEELPTADGRTTNTSTIEIVLARKT

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2z7c-a2-m1-cC 89 89 1.0000 1.0000 1.0000 4.57e-60 2z7c-a2-m1-cC_2z7c-a2-m1-cD
2 2z7c-a2-m1-cD 92 89 1.0000 0.9674 1.0000 4.69e-60 2z7c-a2-m1-cC_2z7c-a2-m1-cD
3 1nfj-a1-m4-cA 87 87 0.7303 0.7471 0.7471 3.41e-39 1nfj-a1-m1-cA_1nfj-a1-m4-cA
4 1nfj-a1-m3-cA 87 87 0.7303 0.7471 0.7471 3.41e-39 1nfj-a1-m1-cA_1nfj-a1-m3-cA
5 1nfj-a1-m1-cA 87 87 0.7303 0.7471 0.7471 3.41e-39 1nfj-a1-m1-cA_1nfj-a1-m3-cA, 1nfj-a1-m1-cA_1nfj-a1-m4-cA
6 1nfh-a1-m2-cB 86 87 0.7303 0.7558 0.7471 3.95e-39 1nfh-a1-m1-cA_1nfh-a1-m2-cB
7 1nfh-a1-m1-cA 86 87 0.7303 0.7558 0.7471 3.95e-39 1nfh-a1-m1-cA_1nfh-a1-m2-cB
8 2bky-a1-m1-cB 89 88 0.5730 0.5730 0.5795 2.39e-33 2bky-a1-m1-cA_2bky-a1-m1-cB
9 2bky-a1-m1-cA 89 88 0.5730 0.5730 0.5795 2.39e-33 2bky-a1-m1-cA_2bky-a1-m1-cB
10 1h0x-a1-m1-cB 89 88 0.5730 0.5730 0.5795 2.39e-33 1h0x-a1-m1-cA_1h0x-a1-m1-cB
11 1h0x-a1-m1-cA 89 88 0.5730 0.5730 0.5795 2.39e-33 1h0x-a1-m1-cA_1h0x-a1-m1-cB
12 3toe-a1-m1-cB 86 85 0.6067 0.6279 0.6353 2.94e-30 3toe-a1-m1-cA_3toe-a1-m1-cB
13 3toe-a1-m1-cA 86 85 0.6067 0.6279 0.6353 2.94e-30 3toe-a1-m1-cA_3toe-a1-m1-cB
14 3wbm-a1-m1-cC 86 88 0.5393 0.5581 0.5455 4.75e-28 3wbm-a1-m1-cA_3wbm-a1-m1-cC
15 3wbm-a1-m1-cA 86 88 0.5393 0.5581 0.5455 4.75e-28 3wbm-a1-m1-cA_3wbm-a1-m1-cC
16 4z9e-a2-m1-cD 85 87 0.5056 0.5294 0.5172 1.06e-25 4z9e-a2-m1-cC_4z9e-a2-m1-cD
17 4z9e-a2-m1-cC 85 87 0.5056 0.5294 0.5172 1.06e-25 4z9e-a2-m1-cC_4z9e-a2-m1-cD
18 3u6y-a1-m1-cC 99 90 0.5169 0.4646 0.5111 2.21e-22 3u6y-a1-m1-cA_3u6y-a1-m1-cC
19 3u6y-a1-m1-cA 99 90 0.5169 0.4646 0.5111 2.21e-22 3u6y-a1-m1-cA_3u6y-a1-m1-cC
20 7dl8-a1-m1-cC 98 30 0.1461 0.1327 0.4333 0.11 7dl8-a1-m1-cC_7dl8-a1-m1-cD
21 7dl8-a1-m1-cD 109 30 0.1461 0.1193 0.4333 0.11 7dl8-a1-m1-cC_7dl8-a1-m1-cD, 7dl8-a1-m1-cD_7dl8-a1-m1-cA
22 5dou-a2-m1-cC 1421 41 0.2022 0.0127 0.4390 0.13 5dou-a2-m1-cC_5dou-a2-m1-cD
23 7dl8-a1-m1-cA 114 30 0.1461 0.1140 0.4333 0.14 7dl8-a1-m1-cD_7dl8-a1-m1-cA
24 5vae-a5-m1-cE 504 66 0.1910 0.0337 0.2576 1.3 5vae-a5-m1-cE_5vae-a5-m1-cG
25 8app-a1-m2-cD 188 46 0.1685 0.0798 0.3261 2.0 8app-a1-m2-cD_8app-a1-m1-cC, 8app-a1-m2-cD_8app-a1-m4-cB, 8app-a1-m3-cA_8app-a1-m2-cD
26 8app-a1-m4-cB 189 46 0.1685 0.0794 0.3261 2.0 8app-a1-m2-cD_8app-a1-m4-cB, 8app-a1-m3-cA_8app-a1-m4-cB, 8app-a1-m4-cB_8app-a1-m1-cC
27 8app-a1-m3-cA 187 46 0.1685 0.0802 0.3261 2.1 8app-a1-m3-cA_8app-a1-m1-cC, 8app-a1-m3-cA_8app-a1-m2-cD, 8app-a1-m3-cA_8app-a1-m4-cB
28 8app-a1-m1-cC 190 46 0.1685 0.0789 0.3261 2.1 8app-a1-m2-cD_8app-a1-m1-cC, 8app-a1-m3-cA_8app-a1-m1-cC, 8app-a1-m4-cB_8app-a1-m1-cC
29 5vae-a5-m1-cG 504 66 0.2022 0.0357 0.2727 3.0 5vae-a5-m1-cE_5vae-a5-m1-cG
30 7lu4-a1-m1-cA 978 77 0.2809 0.0256 0.3247 4.2 7lu4-a1-m1-cB_7lu4-a1-m1-cA
31 7lu4-a1-m1-cB 977 77 0.2809 0.0256 0.3247 4.3 7lu4-a1-m1-cB_7lu4-a1-m1-cA
32 5dou-a2-m1-cD 1430 28 0.1573 0.0098 0.5000 4.3 5dou-a2-m1-cC_5dou-a2-m1-cD
33 4na2-a2-m3-cB 580 45 0.1685 0.0259 0.3333 6.2 4na2-a2-m1-cB_4na2-a2-m3-cB
34 4na2-a2-m1-cB 580 45 0.1685 0.0259 0.3333 6.2 4na2-a2-m1-cB_4na2-a2-m3-cB

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Reference:
Jacob Schwartz et al.

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